Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
LINC00959A0A1B0GUT2 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
LINC00959A0A1B0GUT2 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
LINC00959A0A1B0GUT2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 PBX2P1-201ENST00000493219 1291 ntBASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
LINC00959A0A1B0GUT2 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 AC092667.1-201ENST00000434301 2586 ntBASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 AP005212.1-201ENST00000581547 1997 ntBASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 AC008406.3-201ENST00000620001 1374 ntBASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
LINC00959A0A1B0GUT2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC14.15□□□□□ -0.15
LINC00959A0A1B0GUT2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 AC096631.2-201ENST00000436136 790 ntBASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 AC073314.1-201ENST00000568729 2216 ntBASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LINC00959A0A1B0GUT2 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 MIR572-201ENST00000384983 95 ntBASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.13□□□□□ -0.15
LINC00959A0A1B0GUT2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms