Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.85■□□□□ 0.45
TRAV18A0A075B6X5 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 AP006587.3-201ENST00000525742 1516 ntBASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 AC112907.3-201ENST00000577781 2400 ntBASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.84■□□□□ 0.45
TRAV18A0A075B6X5 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC17.83■□□□□ 0.45
TRAV18A0A075B6X5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 AK3-203ENST00000447596 705 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.83■□□□□ 0.44
TRAV18A0A075B6X5 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
TRAV18A0A075B6X5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TRAV18A0A075B6X5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.8■□□□□ 0.44
TRAV18A0A075B6X5 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms