Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CLIC4Q9Y696 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 AC027612.3-201ENST00000413684 1047 ntBASIC23.8■■□□□ 1.4
CLIC4Q9Y696 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 SLC25A24-204ENST00000569674 2357 ntBASIC23.8■■□□□ 1.4
CLIC4Q9Y696 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CLIC4Q9Y696 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CLIC4Q9Y696 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 AC073314.1-201ENST00000568729 2216 ntBASIC23.78■■□□□ 1.4
CLIC4Q9Y696 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 KRT87P-202ENST00000534226 1464 ntBASIC23.78■■□□□ 1.4
CLIC4Q9Y696 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CLIC4Q9Y696 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 AP004607.4-201ENST00000530158 1459 ntBASIC23.77■■□□□ 1.4
CLIC4Q9Y696 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CLIC4Q9Y696 EXOC3-AS1-202ENST00000623673 1663 ntBASIC23.76■■□□□ 1.39
CLIC4Q9Y696 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CLIC4Q9Y696 PKD1P6-201ENST00000343738 4769 ntBASIC23.76■■□□□ 1.39
CLIC4Q9Y696 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
CLIC4Q9Y696 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CLIC4Q9Y696 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CLIC4Q9Y696 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms