Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 GCSHP5-201ENST00000443090 522 ntBASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 AC006058.3-201ENST00000606217 1069 ntBASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 LINC00565-201ENST00000562710 2331 ntBASIC20.69■□□□□ 0.9
SNX11Q9Y5W9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SNX11Q9Y5W9 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 ECEL1P1-201ENST00000373592 1742 ntBASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 AP006294.2-201ENST00000641667 209 ntBASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SNX11Q9Y5W9 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 AL158047.1-201ENST00000445918 881 ntBASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 AC128676.1-201ENST00000454392 318 ntBASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SNX11Q9Y5W9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 AC003102.1-202ENST00000563394 1796 ntBASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 LSM12P1-201ENST00000411836 588 ntBASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SNX11Q9Y5W9 AC242852.2-201ENST00000615738 1807 ntBASIC20.64■□□□□ 0.9
SNX11Q9Y5W9 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SNX11Q9Y5W9 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SNX11Q9Y5W9 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 AC142381.4-202ENST00000563973 229 ntBASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SNX11Q9Y5W9 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms