Protein–RNA interactions for Protein: Q9UQR0

SCML2, Sex comb on midleg-like protein 2, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML2Q9UQR0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SCML2Q9UQR0 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 Z98882.1-201ENST00000622160 2253 ntBASIC21.76■■□□□ 1.07
SCML2Q9UQR0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 CDV3P1-201ENST00000471403 739 ntBASIC21.76■■□□□ 1.07
SCML2Q9UQR0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 FAM21FP-204ENST00000608637 956 ntBASIC21.76■■□□□ 1.07
SCML2Q9UQR0 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SCML2Q9UQR0 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 SLC29A4P1-201ENST00000398760 971 ntBASIC21.75■■□□□ 1.07
SCML2Q9UQR0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 AC093787.1-201ENST00000450396 207 ntBASIC21.75■■□□□ 1.07
SCML2Q9UQR0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 AC142086.2-201ENST00000569753 217 ntBASIC21.75■■□□□ 1.07
SCML2Q9UQR0 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SCML2Q9UQR0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 AL355802.2-201ENST00000402069 882 ntBASIC21.74■■□□□ 1.07
SCML2Q9UQR0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 AC079834.2-201ENST00000609776 1949 ntBASIC21.74■■□□□ 1.07
SCML2Q9UQR0 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.74■■□□□ 1.07
SCML2Q9UQR0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.73■■□□□ 1.07
SCML2Q9UQR0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
SCML2Q9UQR0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 MKRN4P-201ENST00000444706 1521 ntBASIC21.72■■□□□ 1.07
SCML2Q9UQR0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 AC007322.3-201ENST00000426526 701 ntBASIC21.72■■□□□ 1.07
SCML2Q9UQR0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SCML2Q9UQR0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.71■■□□□ 1.07
SCML2Q9UQR0 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms