Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 PLK5-205ENST00000642079 1969 ntBASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
NIPSNAP3AQ9UFN0 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 SMUG1P1-201ENST00000590640 811 ntBASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NIPSNAP3AQ9UFN0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 AC138932.1-201ENST00000534164 6830 ntBASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NIPSNAP3AQ9UFN0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.83■□□□□ 0.77
NIPSNAP3AQ9UFN0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 GABARAPL3-202ENST00000624044 1851 ntBASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 AIRN-201ENST00000601203 4374 ntBASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
NIPSNAP3AQ9UFN0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 AP005212.1-201ENST00000581547 1997 ntBASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 AC073314.1-201ENST00000568729 2216 ntBASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
NIPSNAP3AQ9UFN0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
NIPSNAP3AQ9UFN0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NIPSNAP3AQ9UFN0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms