Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
COMMD9Q9P000 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.69■□□□□ 0.42
COMMD9Q9P000 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.68■□□□□ 0.42
COMMD9Q9P000 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.68■□□□□ 0.42
COMMD9Q9P000 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
COMMD9Q9P000 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
COMMD9Q9P000 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
COMMD9Q9P000 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 HES6-204ENST00000409182 863 ntTSL 2 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
COMMD9Q9P000 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
COMMD9Q9P000 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
COMMD9Q9P000 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 AC087289.5-201ENST00000586076 3175 ntBASIC17.65■□□□□ 0.42
COMMD9Q9P000 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD9Q9P000 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD9Q9P000 AL499627.2-201ENST00000606283 725 ntBASIC17.65■□□□□ 0.42
COMMD9Q9P000 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.65■□□□□ 0.42
COMMD9Q9P000 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
COMMD9Q9P000 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms