Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
CDC42SE1Q9NRR8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
CDC42SE1Q9NRR8 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 AC139713.2-201ENST00000641328 2723 ntBASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 CROCCP1-201ENST00000426910 5675 ntBASIC10.8□□□□□ -0.68
CDC42SE1Q9NRR8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.79□□□□□ -0.68
CDC42SE1Q9NRR8 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms