Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 FOXRED1-206ENST00000526525 586 ntTSL 413.92□□□□□ -0.183e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-203ENST00000525083 1228 ntTSL 213.92□□□□□ -0.183e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-207ENST00000527004 1760 ntTSL 513.8□□□□□ -0.23e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.253e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.283e-6■■■■□ 23.2
EXOSC5Q9NQT4 LRP3-204ENST00000592484 575 ntTSL 412.48□□□□□ -0.413e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-217ENST00000534011 1955 ntTSL 212.32□□□□□ -0.443e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-202ENST00000524751 895 ntTSL 312.11□□□□□ -0.473e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-205ENST00000526366 553 ntTSL 412.11□□□□□ -0.473e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-212ENST00000532101 1030 ntTSL 512.06□□□□□ -0.483e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-204ENST00000525770 1427 ntTSL 211.34□□□□□ -0.593e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-209ENST00000529802 580 ntTSL 211.33□□□□□ -0.63e-6■■■■□ 23.2
EXOSC5Q9NQT4 ABHD17B-201ENST00000333421 2614 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.713e-6■■■■□ 23.2
EXOSC5Q9NQT4 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.784e-7■■■■□ 23.2
EXOSC5Q9NQT4 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.173e-6■■■■□ 23.2
EXOSC5Q9NQT4 FOXRED1-216ENST00000533839 559 ntTSL 47.54□□□□□ -1.23e-6■■■■□ 23.2
EXOSC5Q9NQT4 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.74e-7■■■■□ 23.2
EXOSC5Q9NQT4 AHCTF1-206ENST00000483900 3451 ntTSL 22.34□□□□□ -2.034e-7■■■■□ 23.2
EXOSC5Q9NQT4 AHCTF1-203ENST00000470300 7041 ntTSL 1 (best)1.47□□□□□ -2.174e-7■■■■□ 23.2
EXOSC5Q9NQT4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.254e-7■■■■□ 23.2
EXOSC5Q9NQT4 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.344e-7■■■■□ 23.2
EXOSC5Q9NQT4 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.384e-7■■■■□ 23.2
EXOSC5Q9NQT4 POM121-204ENST00000446813 3456 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.014e-7■■■■□ 23.2
EXOSC5Q9NQT4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.071e-6■■■■□ 23.2
EXOSC5Q9NQT4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.443e-6■■■■□ 23.2
EXOSC5Q9NQT4 FBXO31-204ENST00000565593 2717 ntTSL 517.42■□□□□ 0.383e-6■■■■□ 23.2
EXOSC5Q9NQT4 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.353e-9■■■■□ 23.2
EXOSC5Q9NQT4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.333e-9■■■■□ 23.2
EXOSC5Q9NQT4 SRBD1-205ENST00000493649 655 ntTSL 43.5□□□□□ -1.852e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-210ENST00000561029 2717 ntTSL 519.14■□□□□ 0.651e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.47■□□□□ 0.231e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.031e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.1□□□□□ -0.631e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.371e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-208ENST00000559367 539 ntTSL 55.93□□□□□ -1.461e-6■■■■□ 23.2
EXOSC5Q9NQT4 ANKRD17-207ENST00000558247 8456 ntAPPRIS ALT2 TSL 1 (best)5.71□□□□□ -1.491e-6■■■■□ 23.2
EXOSC5Q9NQT4 SMCHD1-207ENST00000581711 546 ntTSL 43.97□□□□□ -1.775e-7■■■■□ 23.2
EXOSC5Q9NQT4 SMCHD1-203ENST00000577880 4951 ntTSL 22.63□□□□□ -1.995e-7■■■■□ 23.2
EXOSC5Q9NQT4 SMCHD1-211ENST00000584897 4143 ntTSL 21.93□□□□□ -2.15e-7■■■■□ 23.2
EXOSC5Q9NQT4 ETNK1-203ENST00000538218 1659 ntTSL 1 (best)13.28□□□□□ -0.284e-7■■■■□ 23.1
EXOSC5Q9NQT4 ETNK1-201ENST00000266517 7159 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.624e-7■■■■□ 23.1
EXOSC5Q9NQT4 DEPDC1B-206ENST00000512452 661 ntTSL 211.38□□□□□ -0.594e-7■■■■□ 23.1
EXOSC5Q9NQT4 DEPDC1B-202ENST00000453022 1569 ntTSL 2 BASIC7.03□□□□□ -1.284e-7■■■■□ 23.1
EXOSC5Q9NQT4 DEPDC1B-205ENST00000512078 1596 ntTSL 26.93□□□□□ -1.34e-7■■■■□ 23.1
EXOSC5Q9NQT4 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.484e-7■■■■□ 23.1
EXOSC5Q9NQT4 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.353e-7■■■■□ 23.1
EXOSC5Q9NQT4 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.853e-7■■■■□ 23.1
EXOSC5Q9NQT4 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC11.25□□□□□ -0.611e-6■■■■□ 23.1
EXOSC5Q9NQT4 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.671e-6■■■■□ 23.1
EXOSC5Q9NQT4 ARHGAP12-202ENST00000344936 4128 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.881e-6■■■■□ 23.1
EXOSC5Q9NQT4 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC6.52□□□□□ -1.371e-6■■■■□ 23.1
EXOSC5Q9NQT4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.11□□□□□ -1.911e-6■■■■□ 23.1
EXOSC5Q9NQT4 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.275e-6■■■■□ 23.1
EXOSC5Q9NQT4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.765e-6■■■■□ 23.1
EXOSC5Q9NQT4 PRR4-202ENST00000534923 533 ntTSL 23.55□□□□□ -1.842e-7■■■■□ 23.1
EXOSC5Q9NQT4 HACE1-205ENST00000517424 1866 ntTSL 210.29□□□□□ -0.763e-6■■■■□ 23
EXOSC5Q9NQT4 HACE1-209ENST00000518503 1608 ntTSL 57.23□□□□□ -1.253e-6■■■■□ 23
EXOSC5Q9NQT4 HACE1-206ENST00000517995 2809 ntTSL 1 (best)5.91□□□□□ -1.463e-6■■■■□ 23
EXOSC5Q9NQT4 HACE1-208ENST00000518402 1521 ntTSL 55.18□□□□□ -1.583e-6■■■■□ 23
EXOSC5Q9NQT4 HACE1-203ENST00000369127 5318 ntTSL 1 (best)2.74□□□□□ -1.973e-6■■■■□ 23
EXOSC5Q9NQT4 PDLIM5-216ENST00000511767 463 ntTSL 512.75□□□□□ -0.372e-6■■■■□ 23
EXOSC5Q9NQT4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC17.06■□□□□ 0.321e-6■■■■□ 23
EXOSC5Q9NQT4 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.491e-6■■■■□ 23
EXOSC5Q9NQT4 ANTXR2-201ENST00000307333 1473 ntTSL 1 (best) BASIC7.81□□□□□ -1.161e-6■■■■□ 23
EXOSC5Q9NQT4 ANTXR2-205ENST00000449651 2026 ntTSL 26.34□□□□□ -1.391e-6■■■■□ 23
EXOSC5Q9NQT4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.07□□□□□ -1.441e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.634e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-209ENST00000417528 1023 ntTSL 314.09□□□□□ -0.154e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-215ENST00000453286 819 ntTSL 513.59□□□□□ -0.234e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.254e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-204ENST00000379100 2563 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.784e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-205ENST00000379104 2569 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.784e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-213ENST00000431054 724 ntTSL 49.25□□□□□ -0.934e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-203ENST00000379086 2223 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.944e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-207ENST00000401867 3349 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.954e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-214ENST00000439698 866 ntTSL 58.85□□□□□ -0.994e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-219ENST00000478055 929 ntTSL 28.22□□□□□ -1.094e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-211ENST00000428369 751 ntTSL 27.53□□□□□ -1.24e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-210ENST00000418055 568 ntTSL 56.82□□□□□ -1.324e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-208ENST00000416053 582 ntTSL 35.76□□□□□ -1.494e-6■■■■□ 23
EXOSC5Q9NQT4 P4HA2-212ENST00000428841 427 ntTSL 35.7□□□□□ -1.54e-6■■■■□ 23
EXOSC5Q9NQT4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.268e-7■■■■□ 23
EXOSC5Q9NQT4 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.362e-7■■■■□ 23
EXOSC5Q9NQT4 AP3S1-208ENST00000515066 1670 ntTSL 214.07□□□□□ -0.162e-7■■■■□ 23
EXOSC5Q9NQT4 AP3S1-204ENST00000506430 718 ntTSL 513.31□□□□□ -0.282e-7■■■■□ 23
EXOSC5Q9NQT4 AP3S1-202ENST00000395548 1180 ntTSL 1 (best)5.22□□□□□ -1.572e-7■■■■□ 23
EXOSC5Q9NQT4 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.63□□□□□ -1.992e-7■■■■□ 23
EXOSC5Q9NQT4 AP3S1-205ENST00000507436 289 ntTSL 21.78□□□□□ -2.122e-7■■■■□ 23
EXOSC5Q9NQT4 CEP83-201ENST00000339839 3130 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.661e-6■■■■□ 22.9
EXOSC5Q9NQT4 CEP83-203ENST00000397809 3773 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.691e-6■■■■□ 22.9
EXOSC5Q9NQT4 CEP83-207ENST00000547232 2166 ntTSL 1 (best)10.14□□□□□ -0.791e-6■■■■□ 22.9
EXOSC5Q9NQT4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.826e-7■■■■□ 22.9
EXOSC5Q9NQT4 G3BP1-212ENST00000522761 1763 ntTSL 214.25□□□□□ -0.133e-7■■■■□ 22.9
EXOSC5Q9NQT4 G3BP1-208ENST00000520177 2700 ntTSL 1 (best)13.09□□□□□ -0.313e-7■■■■□ 22.9
EXOSC5Q9NQT4 G3BP1-201ENST00000356245 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.733e-7■■■■□ 22.9
EXOSC5Q9NQT4 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.563e-7■■■■□ 22.9
EXOSC5Q9NQT4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.373e-7■■■■□ 22.9
EXOSC5Q9NQT4 GOLGA3-205ENST00000537317 298 ntTSL 312.31□□□□□ -0.443e-7■■■■□ 22.9
EXOSC5Q9NQT4 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.633e-7■■■■□ 22.9
EXOSC5Q9NQT4 GOLGA3-207ENST00000545875 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.873e-7■■■■□ 22.9
Retrieved 100 of 8,799 protein–RNA pairs in 141 ms