RNA–Protein interactions for RNA: ENST00000507436.1

AP3S1-205, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-205ENST00000507436 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
AP3S1-205ENST00000507436 CHIC1Q5VXU3 224 aa18.79■□□□□ 0.6
AP3S1-205ENST00000507436 SENP3Q9H4L4 574 aaPredicted RBP17.25■□□□□ 0.35
AP3S1-205ENST00000507436 PHF23Q9BUL5 403 aaPredicted RBP16.92■□□□□ 0.3
AP3S1-205ENST00000507436 FOXD1Q16676 465 aa16.12■□□□□ 0.17
AP3S1-205ENST00000507436 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
AP3S1-205ENST00000507436 MSH5O43196 834 aa15.37■□□□□ 0.05
AP3S1-205ENST00000507436 PIAS4Q8N2W9 510 aaPredicted RBP14.97□□□□□ -0.01
AP3S1-205ENST00000507436 PPP6R1Q9UPN7 881 aa14.57□□□□□ -0.08
AP3S1-205ENST00000507436 ADRA2BP18089 450 aa14.52□□□□□ -0.09
AP3S1-205ENST00000507436 PLPPR3Q6T4P5 718 aa14.49□□□□□ -0.09
AP3S1-205ENST00000507436 CACNB1Q02641 598 aaPredicted RBP13.61□□□□□ -0.23
AP3S1-205ENST00000507436 DMRT2Q9Y5R5 561 aa13.55□□□□□ -0.24
AP3S1-205ENST00000507436 MAPK8IP2Q13387 824 aaPredicted RBP13.52□□□□□ -0.25
AP3S1-205ENST00000507436 SCAF1Q9H7N4 1312 aaKnown RBP13.35□□□□□ -0.27
AP3S1-205ENST00000507436 DCAF8L1A6NGE4 600 aa13.15□□□□□ -0.3
AP3S1-205ENST00000507436 RNF39Q9H2S5 420 aa13.02□□□□□ -0.33
AP3S1-205ENST00000507436 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
AP3S1-205ENST00000507436 HOXD11P31277 338 aaPredicted RBP12.78□□□□□ -0.36
AP3S1-205ENST00000507436 PPP4R3CPQ6ZMV5 832 aa12.6□□□□□ -0.39
AP3S1-205ENST00000507436 RNF216Q9NWF9 866 aaPredicted RBP12.55□□□□□ -0.4
AP3S1-205ENST00000507436 CNKSR2Q8WXI2 1034 aa12.52□□□□□ -0.41
AP3S1-205ENST00000507436 POTEHQ6S545 545 aa12.48□□□□□ -0.41
AP3S1-205ENST00000507436 DNAJC5BQ9UF47 199 aa12.45□□□□□ -0.42
AP3S1-205ENST00000507436 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.28□□□□□ -0.44
AP3S1-205ENST00000507436 DSG3P32926 999 aa11.99□□□□□ -0.49
AP3S1-205ENST00000507436 CAPN15O75808 1086 aa11.98□□□□□ -0.49
AP3S1-205ENST00000507436 NCBP3Q53F19 620 aaKnown RBP11.97□□□□□ -0.49
AP3S1-205ENST00000507436 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
AP3S1-205ENST00000507436 U3KPZ7 1027 aaPredicted RBP11.87□□□□□ -0.51
AP3S1-205ENST00000507436 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
AP3S1-205ENST00000507436 TRHP20396 242 aaPredicted RBP11.64□□□□□ -0.55
AP3S1-205ENST00000507436 ABCB7O75027 752 aa11.63□□□□□ -0.55
AP3S1-205ENST00000507436 ZNF219Q9P2Y4 722 aaPredicted RBP11.57□□□□□ -0.56
AP3S1-205ENST00000507436 APLP2Q06481 763 aa11.56□□□□□ -0.56
AP3S1-205ENST00000507436 RBM42Q9BTD8 480 aaKnown RBP11.51□□□□□ -0.57
AP3S1-205ENST00000507436 CHRDL2Q6WN34 429 aa11.49□□□□□ -0.57
AP3S1-205ENST00000507436 SP7Q8TDD2 431 aaPredicted RBP11.4□□□□□ -0.58
AP3S1-205ENST00000507436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.38□□□□□ -0.59
AP3S1-205ENST00000507436 HNRNPUL2Q1KMD3 747 aaKnown RBP11.38□□□□□ -0.59
AP3S1-205ENST00000507436 SLC4A2P04920 1241 aa11.35□□□□□ -0.59
AP3S1-205ENST00000507436 SAMD1Q6SPF0 538 aaPredicted RBP11.27□□□□□ -0.61
AP3S1-205ENST00000507436 POLA2Q14181 598 aa11.15□□□□□ -0.62
AP3S1-205ENST00000507436 HAX1O00165 279 aa11.1□□□□□ -0.63
AP3S1-205ENST00000507436 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
AP3S1-205ENST00000507436 PIP4P2Q8N4L2 257 aa11.06□□□□□ -0.64
AP3S1-205ENST00000507436 REM2Q8IYK8 340 aaPredicted RBP10.97□□□□□ -0.65
AP3S1-205ENST00000507436 KCNA4P22459 653 aa10.96□□□□□ -0.65
AP3S1-205ENST00000507436 MYCNP04198 464 aaPredicted RBP10.9□□□□□ -0.66
AP3S1-205ENST00000507436 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
AP3S1-205ENST00000507436 FXR2P51116 673 aaKnown RBP eCLIP10.87□□□□□ -0.67
AP3S1-205ENST00000507436 PITPNM1O00562 1244 aa10.86□□□□□ -0.67
AP3S1-205ENST00000507436 EVX2Q03828 476 aa10.82□□□□□ -0.68
AP3S1-205ENST00000507436 OSCARQ8IYS5 282 aa10.82□□□□□ -0.68
AP3S1-205ENST00000507436 LHX8Q68G74 356 aa10.7□□□□□ -0.7
AP3S1-205ENST00000507436 ATF5Q9Y2D1 282 aaPredicted RBP10.66□□□□□ -0.7
AP3S1-205ENST00000507436 PRKAR2AP13861 404 aaKnown RBP10.61□□□□□ -0.71
AP3S1-205ENST00000507436 PLSCR2Q9NRY7 297 aa10.61□□□□□ -0.71
AP3S1-205ENST00000507436 GABBR2O75899 941 aa10.57□□□□□ -0.72
AP3S1-205ENST00000507436 C19orf67A6NJJ6 358 aa10.55□□□□□ -0.72
AP3S1-205ENST00000507436 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
AP3S1-205ENST00000507436 SPDYE2BA6NHP3 402 aa10.47□□□□□ -0.73
AP3S1-205ENST00000507436 SPDYE6P0CI01 402 aa10.47□□□□□ -0.73
AP3S1-205ENST00000507436 SPDYE2Q495Y8 402 aa10.47□□□□□ -0.73
AP3S1-205ENST00000507436 SPDYE1Q8NFV5 336 aaPredicted RBP10.47□□□□□ -0.73
AP3S1-205ENST00000507436 FOXD4L1Q9NU39 408 aa10.45□□□□□ -0.74
AP3S1-205ENST00000507436 FBLN2P98095 1184 aa10.37□□□□□ -0.75
AP3S1-205ENST00000507436 CHADLQ6NUI6 762 aa10.35□□□□□ -0.75
AP3S1-205ENST00000507436 POTEIP0CG38 1075 aa10.3□□□□□ -0.76
AP3S1-205ENST00000507436 ZNF692Q9BU19 519 aaPredicted RBP10.29□□□□□ -0.76
AP3S1-205ENST00000507436 SLC4A1APQ9BWU0 796 aaKnown RBP10.26□□□□□ -0.77
AP3S1-205ENST00000507436 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
AP3S1-205ENST00000507436 CD44P16070 742 aaKnown RBP10.24□□□□□ -0.77
AP3S1-205ENST00000507436 DCBLD2Q96PD2 775 aa10.22□□□□□ -0.77
AP3S1-205ENST00000507436 SSUH2Q9Y2M2 353 aa10.22□□□□□ -0.77
AP3S1-205ENST00000507436 CLCN6P51797 869 aa10.2□□□□□ -0.78
AP3S1-205ENST00000507436 ATXN8OSP0DMR3 200 aa10.16□□□□□ -0.78
AP3S1-205ENST00000507436 POTEMA6NI47 508 aa10.12□□□□□ -0.79
AP3S1-205ENST00000507436 MKRN4PQ13434 485 aaPredicted RBP10.12□□□□□ -0.79
AP3S1-205ENST00000507436 FARP1Q9Y4F1 1045 aaPredicted RBP10.11□□□□□ -0.79
AP3S1-205ENST00000507436 PABPN1Q86U42 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
AP3S1-205ENST00000507436 OTUD5Q96G74 571 aa10.07□□□□□ -0.8
AP3S1-205ENST00000507436 POTEGQ6S5H5 508 aa10.06□□□□□ -0.8
AP3S1-205ENST00000507436 ZBTB22O15209 634 aa10.02□□□□□ -0.81
AP3S1-205ENST00000507436 ZNF579Q8NAF0 562 aaKnown RBP10.01□□□□□ -0.81
AP3S1-205ENST00000507436 ZRANB1Q9UGI0 708 aa10.01□□□□□ -0.81
AP3S1-205ENST00000507436 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
AP3S1-205ENST00000507436 POTEB2H3BUK9 544 aa9.96□□□□□ -0.82
AP3S1-205ENST00000507436 GALR2O43603 387 aaPredicted RBP9.94□□□□□ -0.82
AP3S1-205ENST00000507436 PAK3O75914 559 aaPredicted RBP9.83□□□□□ -0.84
AP3S1-205ENST00000507436 PELP1Q8IZL8 1130 aaKnown RBP9.78□□□□□ -0.84
AP3S1-205ENST00000507436 PHF12Q96QT6 1004 aa9.78□□□□□ -0.84
AP3S1-205ENST00000507436 FAM163AQ96GL9 167 aaPredicted RBP9.77□□□□□ -0.85
AP3S1-205ENST00000507436 CREBZFQ9NS37 354 aa9.77□□□□□ -0.85
AP3S1-205ENST00000507436 MAMSTRQ6ZN01 415 aa9.76□□□□□ -0.85
AP3S1-205ENST00000507436 METRNQ9UJH8 293 aa9.76□□□□□ -0.85
AP3S1-205ENST00000507436 SLC39A7Q92504 469 aa9.72□□□□□ -0.85
AP3S1-205ENST00000507436 C7P10643 843 aa9.71□□□□□ -0.86
AP3S1-205ENST00000507436 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
AP3S1-205ENST00000507436 STAG3Q9UJ98 1225 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms