Protein–RNA interactions for Protein: Q9HCF6

TRPM3, Transient receptor potential cation channel subfamily M member 3, humanhuman

Predicted RBP Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3Q9HCF6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC28.38■■■□□ 2.13
TRPM3Q9HCF6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
TRPM3Q9HCF6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC28.38■■■□□ 2.13
TRPM3Q9HCF6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
TRPM3Q9HCF6 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC28.37■■■□□ 2.13
TRPM3Q9HCF6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 FAM210CP-201ENST00000445714 574 ntBASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.36■■■□□ 2.13
TRPM3Q9HCF6 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 AC068473.5-201ENST00000616428 2072 ntBASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 AC233702.5-201ENST00000584107 538 ntBASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 CRK-204ENST00000574295 1391 ntTSL 5 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC28.35■■■□□ 2.13
TRPM3Q9HCF6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 KRT18P68-201ENST00000392293 1000 ntBASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 MAX-217ENST00000557277 728 ntTSL 3 BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 AC124016.1-201ENST00000609552 612 ntBASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 AC010331.1-201ENST00000611423 582 ntBASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
TRPM3Q9HCF6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
TRPM3Q9HCF6 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 AC087633.2-202ENST00000565166 1439 ntBASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 TSPY7P-201ENST00000431358 1114 ntBASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
TRPM3Q9HCF6 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms