Protein–RNA interactions for Protein: Q9HB58

SP110, Sp110 nuclear body protein, humanhuman

Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP110Q9HB58 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP110Q9HB58 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SP110Q9HB58 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP110Q9HB58 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SP110Q9HB58 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.35■■□□□ 1.01
SP110Q9HB58 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21.35■■□□□ 1.01
SP110Q9HB58 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.35■■□□□ 1.01
SP110Q9HB58 FEM1AP4-201ENST00000443167 1987 ntBASIC21.35■■□□□ 1.01
SP110Q9HB58 AC007375.3-201ENST00000600936 2314 ntBASIC21.35■■□□□ 1.01
SP110Q9HB58 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP110Q9HB58 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SP110Q9HB58 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.35■■□□□ 1.01
SP110Q9HB58 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.35■■□□□ 1.01
SP110Q9HB58 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SP110Q9HB58 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.35■■□□□ 1.01
SP110Q9HB58 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SP110Q9HB58 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.34■■□□□ 1.01
SP110Q9HB58 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SP110Q9HB58 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.34■■□□□ 1.01
SP110Q9HB58 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.34■■□□□ 1.01
SP110Q9HB58 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.34■■□□□ 1.01
SP110Q9HB58 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
SP110Q9HB58 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.34■■□□□ 1.01
SP110Q9HB58 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.34■■□□□ 1.01
SP110Q9HB58 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SP110Q9HB58 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.33■■□□□ 1.01
SP110Q9HB58 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
SP110Q9HB58 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.33■■□□□ 1.01
SP110Q9HB58 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SP110Q9HB58 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.33■■□□□ 1.01
SP110Q9HB58 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.33■■□□□ 1.01
SP110Q9HB58 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP110Q9HB58 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP110Q9HB58 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP110Q9HB58 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.33■■□□□ 1.01
SP110Q9HB58 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SP110Q9HB58 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SP110Q9HB58 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
SP110Q9HB58 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.33■■□□□ 1.01
SP110Q9HB58 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.33■■□□□ 1.01
SP110Q9HB58 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.33■■□□□ 1.01
SP110Q9HB58 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
SP110Q9HB58 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.33■■□□□ 1
SP110Q9HB58 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
SP110Q9HB58 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.33■■□□□ 1
SP110Q9HB58 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1
SP110Q9HB58 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SP110Q9HB58 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SP110Q9HB58 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
SP110Q9HB58 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SP110Q9HB58 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SP110Q9HB58 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
SP110Q9HB58 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.32■■□□□ 1
SP110Q9HB58 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC21.32■■□□□ 1
SP110Q9HB58 AC245052.3-201ENST00000450182 901 ntBASIC21.32■■□□□ 1
SP110Q9HB58 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC21.32■■□□□ 1
SP110Q9HB58 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.32■■□□□ 1
SP110Q9HB58 SLC7A5P1-201ENST00000568957 537 ntBASIC21.32■■□□□ 1
SP110Q9HB58 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.32■■□□□ 1
SP110Q9HB58 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.32■■□□□ 1
SP110Q9HB58 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
SP110Q9HB58 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
SP110Q9HB58 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.31■■□□□ 1
SP110Q9HB58 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 AC006015.1-201ENST00000429970 570 ntBASIC21.31■■□□□ 1
SP110Q9HB58 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.31■■□□□ 1
SP110Q9HB58 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.31■■□□□ 1
SP110Q9HB58 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.31■■□□□ 1
SP110Q9HB58 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
SP110Q9HB58 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 AF106564.1-201ENST00000607058 2553 ntBASIC21.31■■□□□ 1
SP110Q9HB58 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
SP110Q9HB58 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC21.3■■□□□ 1
SP110Q9HB58 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.3■■□□□ 1
SP110Q9HB58 BRI3-207ENST00000539286 699 ntTSL 2 BASIC21.3■■□□□ 1
SP110Q9HB58 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
SP110Q9HB58 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.3■■□□□ 1
SP110Q9HB58 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 IKBKGP1-201ENST00000612193 1073 ntBASIC21.3■■□□□ 1
SP110Q9HB58 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.3■■□□□ 1
SP110Q9HB58 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.3■■□□□ 1
SP110Q9HB58 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SP110Q9HB58 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms