Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 EXOC3-AS1-202ENST00000623673 1663 ntBASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 AC026185.1-201ENST00000445748 174 ntBASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
VRTNQ9H8Y1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 AC007322.1-201ENST00000426983 750 ntBASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 AC068338.2-201ENST00000563278 1430 ntBASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
VRTNQ9H8Y1 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.27■■□□□ 1.15
VRTNQ9H8Y1 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 AL591742.1-201ENST00000604433 565 ntBASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
VRTNQ9H8Y1 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.25■■□□□ 1.15
VRTNQ9H8Y1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 SAPCD2P1-201ENST00000395413 1184 ntBASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
VRTNQ9H8Y1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 CROCCP5-201ENST00000436658 830 ntBASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.23■■□□□ 1.15
VRTNQ9H8Y1 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
VRTNQ9H8Y1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
VRTNQ9H8Y1 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms