Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 KRT18P21-201ENST00000515767 1272 ntBASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 AC133552.2-202ENST00000575694 574 ntBASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SCAF1Q9H7N4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 AC104187.1-201ENST00000607510 612 ntBASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC30.85■■■□□ 2.53
SCAF1Q9H7N4 C11orf96-202ENST00000528572 1834 ntBASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
SCAF1Q9H7N4 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 AC008550.1-201ENST00000511500 884 ntBASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 AC073912.3-201ENST00000624414 853 ntBASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 AC092068.2-201ENST00000590491 1708 ntBASIC30.83■■■□□ 2.53
SCAF1Q9H7N4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 ALDH1A3-203ENST00000557963 1670 ntBASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 AC128676.1-201ENST00000454392 318 ntBASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
SCAF1Q9H7N4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
SCAF1Q9H7N4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 AC211429.1-201ENST00000415277 523 ntBASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
SCAF1Q9H7N4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC30.79■■■□□ 2.52
SCAF1Q9H7N4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms