Protein–RNA interactions for Protein: Q9H4Q3

PRDM13, PR domain zinc finger protein 13, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM13Q9H4Q3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 SLC7A5P1-201ENST00000568957 537 ntBASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 UBE2DNL-204ENST00000602536 740 ntBASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 MYCNOS-205ENST00000641950 531 ntBASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.22■□□□□ 0.35
PRDM13Q9H4Q3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 MIR663A-201ENST00000385250 93 ntBASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.21■□□□□ 0.35
PRDM13Q9H4Q3 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.21■□□□□ 0.34
PRDM13Q9H4Q3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 EEF1DP3-203ENST00000566025 782 ntBASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.2■□□□□ 0.34
PRDM13Q9H4Q3 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 AC007322.1-201ENST00000426983 750 ntBASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 AC142086.2-201ENST00000569753 217 ntBASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 AC053503.5-201ENST00000601508 636 ntBASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PRDM13Q9H4Q3 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 AL121832.2-201ENST00000610979 668 ntBASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 AL050303.2-201ENST00000619798 666 ntBASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PRDM13Q9H4Q3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM13Q9H4Q3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM13Q9H4Q3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.17■□□□□ 0.34
PRDM13Q9H4Q3 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM13Q9H4Q3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
PRDM13Q9H4Q3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRDM13Q9H4Q3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms