Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.84■□□□□ 0.77
VCX3BQ9H321 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
VCX3BQ9H321 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
VCX3BQ9H321 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3BQ9H321 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3BQ9H321 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 AC027702.1-201ENST00000563810 1770 ntBASIC19.83■□□□□ 0.77
VCX3BQ9H321 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3BQ9H321 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.83■□□□□ 0.77
VCX3BQ9H321 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3BQ9H321 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
VCX3BQ9H321 MIR6765-201ENST00000614092 87 ntBASIC19.83■□□□□ 0.77
VCX3BQ9H321 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC19.83■□□□□ 0.76
VCX3BQ9H321 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.83■□□□□ 0.76
VCX3BQ9H321 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.76
VCX3BQ9H321 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
VCX3BQ9H321 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 CEP120-209ENST00000515110 606 ntTSL 3 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
VCX3BQ9H321 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.82■□□□□ 0.76
VCX3BQ9H321 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.81■□□□□ 0.76
VCX3BQ9H321 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 AL592293.1-201ENST00000502889 1188 ntBASIC19.81■□□□□ 0.76
VCX3BQ9H321 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 AC098818.2-201ENST00000564925 2320 ntBASIC19.81■□□□□ 0.76
VCX3BQ9H321 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
VCX3BQ9H321 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.81■□□□□ 0.76
VCX3BQ9H321 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
VCX3BQ9H321 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
VCX3BQ9H321 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms