Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.84■□□□□ 0.93
NDNQ99608 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.84■□□□□ 0.93
NDNQ99608 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NDNQ99608 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 AL157384.1-201ENST00000445995 2473 ntBASIC20.83■□□□□ 0.93
NDNQ99608 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.83■□□□□ 0.93
NDNQ99608 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.83■□□□□ 0.93
NDNQ99608 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
NDNQ99608 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
NDNQ99608 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.83■□□□□ 0.93
NDNQ99608 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.83■□□□□ 0.93
NDNQ99608 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.83■□□□□ 0.93
NDNQ99608 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.83■□□□□ 0.93
NDNQ99608 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NDNQ99608 AL358852.1-201ENST00000623174 1268 ntBASIC20.83■□□□□ 0.93
NDNQ99608 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.93
NDNQ99608 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
NDNQ99608 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDNQ99608 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDNQ99608 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDNQ99608 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDNQ99608 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
NDNQ99608 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.82■□□□□ 0.92
NDNQ99608 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.82■□□□□ 0.92
NDNQ99608 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NDNQ99608 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
NDNQ99608 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
NDNQ99608 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
NDNQ99608 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
NDNQ99608 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.82■□□□□ 0.92
NDNQ99608 IRS3P-201ENST00000223076 1006 ntBASIC20.82■□□□□ 0.92
NDNQ99608 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.82■□□□□ 0.92
NDNQ99608 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.82■□□□□ 0.92
NDNQ99608 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.82■□□□□ 0.92
NDNQ99608 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
NDNQ99608 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDNQ99608 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDNQ99608 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.81■□□□□ 0.92
NDNQ99608 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NDNQ99608 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDNQ99608 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.81■□□□□ 0.92
NDNQ99608 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.81■□□□□ 0.92
NDNQ99608 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
NDNQ99608 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
NDNQ99608 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
NDNQ99608 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
NDNQ99608 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.81■□□□□ 0.92
NDNQ99608 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.8■□□□□ 0.92
NDNQ99608 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
NDNQ99608 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.8■□□□□ 0.92
NDNQ99608 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
NDNQ99608 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.8■□□□□ 0.92
NDNQ99608 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
NDNQ99608 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.79■□□□□ 0.92
NDNQ99608 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC20.79■□□□□ 0.92
NDNQ99608 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
NDNQ99608 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms