Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 RARRES2P4-201ENST00000514074 484 ntBASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 FAM21FP-204ENST00000608637 956 ntBASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDK5RAP1Q96SZ6 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDK5RAP1Q96SZ6 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
CDK5RAP1Q96SZ6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 GUSBP6-202ENST00000438529 1198 ntBASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 EP400NL-214ENST00000641289 2402 ntBASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 MKRN4P-201ENST00000444706 1521 ntBASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC21.65■■□□□ 1.06
CDK5RAP1Q96SZ6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDK5RAP1Q96SZ6 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.64■■□□□ 1.06
CDK5RAP1Q96SZ6 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 AL355802.2-201ENST00000402069 882 ntBASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 AC142086.2-201ENST00000569753 217 ntBASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDK5RAP1Q96SZ6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 AC016405.3-201ENST00000607710 860 ntBASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 AC100791.3-201ENST00000617619 330 ntBASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 CLDN5-201ENST00000403084 2357 ntBASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.63■■□□□ 1.05
CDK5RAP1Q96SZ6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 AC007322.3-201ENST00000426526 701 ntBASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDK5RAP1Q96SZ6 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms