Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 AL445675.2-201ENST00000620291 557 ntBASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AL353807.1-201ENST00000427475 662 ntBASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AL390955.1-201ENST00000428694 934 ntBASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AC091390.4-202ENST00000476426 537 ntBASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 FGF8-207ENST00000618991 856 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 KRT18P20-201ENST00000548986 1279 ntBASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 KRASP1-201ENST00000407852 552 ntBASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SYNE2Q8WXH0 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 VENTXP5-201ENST00000523979 775 ntBASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 GRAMD4P8-201ENST00000605465 1115 ntBASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 AC073195.1-201ENST00000607241 877 ntBASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 KRT8P8-201ENST00000434750 1448 ntBASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 GGT1-206ENST00000404223 952 ntTSL 2 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SYNE2Q8WXH0 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 PRELID1P1-202ENST00000567272 903 ntBASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 AC130371.2-201ENST00000619443 611 ntBASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 PMS2P2-201ENST00000425039 1128 ntBASIC8.59□□□□□ -1.03
SYNE2Q8WXH0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms