Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SMIM4Q8WVI0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 AC021242.3-201ENST00000607598 1377 ntBASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SMIM4Q8WVI0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 AC098818.2-201ENST00000564925 2320 ntBASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.81■□□□□ 0.44
SMIM4Q8WVI0 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 AC116562.4-201ENST00000641316 2276 ntBASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.8■□□□□ 0.44
SMIM4Q8WVI0 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SMIM4Q8WVI0 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 AP004607.7-201ENST00000527152 1677 ntBASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 ATP5G2P3-201ENST00000429083 425 ntBASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 AC010141.3-201ENST00000456659 717 ntBASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
SMIM4Q8WVI0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms