Protein–RNA interactions for Protein: Q8WUY3

PRUNE2, Protein prune homolog 2, humanhuman

Predictions only

Length 3,088 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2Q8WUY3 AC138932.3-201ENST00000567634 1902 ntBASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 RARRES2P10-201ENST00000564312 460 ntBASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
PRUNE2Q8WUY3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 AC026396.1-201ENST00000419388 421 ntBASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC22.05■■□□□ 1.12
PRUNE2Q8WUY3 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 OR2A1-AS1-207ENST00000486094 819 ntBASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 LINC00526-201ENST00000581067 1875 ntBASIC22.04■■□□□ 1.12
PRUNE2Q8WUY3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 AL589743.5-201ENST00000616611 1050 ntBASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 DUSP5P1-201ENST00000441325 1139 ntBASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 LTBR-211ENST00000543190 785 ntTSL 3 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PRUNE2Q8WUY3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 GCK-205ENST00000437084 1385 ntTSL 5 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 DUX4L26-201ENST00000489078 1255 ntBASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PRUNE2Q8WUY3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.02■■□□□ 1.11
PRUNE2Q8WUY3 AC061975.6-201ENST00000579045 1553 ntBASIC22.02■■□□□ 1.11
PRUNE2Q8WUY3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PRUNE2Q8WUY3 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PRUNE2Q8WUY3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC22.01■■□□□ 1.11
PRUNE2Q8WUY3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PRUNE2Q8WUY3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC22■■□□□ 1.11
PRUNE2Q8WUY3 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22■■□□□ 1.11
PRUNE2Q8WUY3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22■■□□□ 1.11
PRUNE2Q8WUY3 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 15.1 ms