Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
CHD5Q8TDI0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 AF201337.1-201ENST00000520239 748 ntBASIC21.21■□□□□ 0.99
CHD5Q8TDI0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.21■□□□□ 0.99
CHD5Q8TDI0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.2■□□□□ 0.99
CHD5Q8TDI0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.2■□□□□ 0.98
CHD5Q8TDI0 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.2■□□□□ 0.98
CHD5Q8TDI0 PPP1R14BP3-201ENST00000509033 445 ntBASIC21.2■□□□□ 0.98
CHD5Q8TDI0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CHD5Q8TDI0 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.2■□□□□ 0.98
CHD5Q8TDI0 AF106564.1-201ENST00000607058 2553 ntBASIC21.2■□□□□ 0.98
CHD5Q8TDI0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD5Q8TDI0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHD5Q8TDI0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 AC007322.1-201ENST00000426983 750 ntBASIC21.19■□□□□ 0.98
CHD5Q8TDI0 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CHD5Q8TDI0 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.18■□□□□ 0.98
CHD5Q8TDI0 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHD5Q8TDI0 NCF1B-203ENST00000435988 1254 ntBASIC21.17■□□□□ 0.98
CHD5Q8TDI0 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 AC116050.2-201ENST00000612102 1779 ntBASIC21.17■□□□□ 0.98
CHD5Q8TDI0 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.17■□□□□ 0.98
CHD5Q8TDI0 AC133552.2-202ENST00000575694 574 ntBASIC21.17■□□□□ 0.98
CHD5Q8TDI0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CHD5Q8TDI0 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.16■□□□□ 0.98
CHD5Q8TDI0 AC016405.3-201ENST00000607710 860 ntBASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms