Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 AC092667.1-201ENST00000434301 2586 ntBASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.98■□□□□ 0.79
CLHC1Q8NHS4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 FEM1AP1-201ENST00000431297 1995 ntBASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CLHC1Q8NHS4 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 LINC01521-201ENST00000504184 1943 ntBASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.96■□□□□ 0.79
CLHC1Q8NHS4 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 AC006128.1-201ENST00000624704 1661 ntBASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CLHC1Q8NHS4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CLHC1Q8NHS4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 SUDS3P1-201ENST00000505831 966 ntBASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 MIR6084-201ENST00000622012 110 ntBASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
CLHC1Q8NHS4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms