Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 LSINCT5-201ENST00000626215 2647 ntBASIC13.22□□□□□ -0.29
SVIPQ8NHG7 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SVIPQ8NHG7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.21□□□□□ -0.29
SVIPQ8NHG7 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SVIPQ8NHG7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SVIPQ8NHG7 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.21□□□□□ -0.3
SVIPQ8NHG7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
SVIPQ8NHG7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
SVIPQ8NHG7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SVIPQ8NHG7 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 AC013726.1-201ENST00000563747 2285 ntBASIC13.2□□□□□ -0.3
SVIPQ8NHG7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 LINC02228-204ENST00000642115 2962 ntBASIC13.2□□□□□ -0.3
SVIPQ8NHG7 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.2□□□□□ -0.3
SVIPQ8NHG7 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
SVIPQ8NHG7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 AC087164.2-201ENST00000624514 3130 ntBASIC13.19□□□□□ -0.3
SVIPQ8NHG7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 SLC5A11-202ENST00000424767 2399 ntTSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 CICP24-201ENST00000605464 2705 ntBASIC13.19□□□□□ -0.3
SVIPQ8NHG7 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms