Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
ZNF440Q8IYI8 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 KRT18P20-201ENST00000548986 1279 ntBASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 AP001160.3-201ENST00000601484 763 ntBASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 AC104187.1-201ENST00000607510 612 ntBASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 AC121338.2-201ENST00000622535 1744 ntBASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ZNF440Q8IYI8 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 AC245052.3-201ENST00000450182 901 ntBASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.03■□□□□ 0.64
ZNF440Q8IYI8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ZNF440Q8IYI8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.02■□□□□ 0.63
ZNF440Q8IYI8 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
ZNF440Q8IYI8 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 AC006128.1-201ENST00000624704 1661 ntBASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ZNF440Q8IYI8 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 KRT19P1-201ENST00000405746 1186 ntBASIC19■□□□□ 0.63
ZNF440Q8IYI8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
ZNF440Q8IYI8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19■□□□□ 0.63
ZNF440Q8IYI8 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
ZNF440Q8IYI8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.98■□□□□ 0.63
ZNF440Q8IYI8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
ZNF440Q8IYI8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms