Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 EDA-201ENST00000338901 1233 ntBASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 FXN-202ENST00000396364 980 ntTSL 5 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
MRPL55Q7Z7F7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 AL049796.1-201ENST00000565336 1766 ntBASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
MRPL55Q7Z7F7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 AL355001.2-201ENST00000620617 1191 ntBASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
MRPL55Q7Z7F7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.33□□□□□ -0.27
MRPL55Q7Z7F7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
MRPL55Q7Z7F7 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms