Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 AC090192.1-201ENST00000517740 490 ntBASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 AC098818.2-201ENST00000564925 2320 ntBASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
FOXR1Q6PIV2 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
FOXR1Q6PIV2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.04
FOXR1Q6PIV2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXR1Q6PIV2 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.58■■□□□ 1.04
FOXR1Q6PIV2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
FOXR1Q6PIV2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXR1Q6PIV2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
FOXR1Q6PIV2 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 AL137784.2-201ENST00000607332 1000 ntBASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
FOXR1Q6PIV2 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 AC022517.1-201ENST00000592429 346 ntBASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 RARRES2P11-201ENST00000635158 484 ntBASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
FOXR1Q6PIV2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 AL031602.1-201ENST00000633169 911 ntBASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
FOXR1Q6PIV2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms