Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 AC018470.1-201ENST00000624790 3129 ntBASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CDPF1Q6NVV7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CDPF1Q6NVV7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 RNF146-205ENST00000477776 762 ntTSL 3 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CDPF1Q6NVV7 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 AC011270.2-201ENST00000624293 2550 ntBASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 LONRF2P2-201ENST00000439212 571 ntBASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CDPF1Q6NVV7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDPF1Q6NVV7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC15.77■□□□□ 0.11
CDPF1Q6NVV7 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
CDPF1Q6NVV7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
CDPF1Q6NVV7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 THA1P-201ENST00000590384 1145 ntBASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CDPF1Q6NVV7 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms