Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 ZNRF2P3-201ENST00000424200 374 ntBASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
ATPAF1Q5TC12 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
ATPAF1Q5TC12 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18■□□□□ 0.47
ATPAF1Q5TC12 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
ATPAF1Q5TC12 AC019069.1-201ENST00000610008 1333 ntBASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
ATPAF1Q5TC12 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 BX005040.4-201ENST00000637145 1518 ntBASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
ATPAF1Q5TC12 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
ATPAF1Q5TC12 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.96■□□□□ 0.47
ATPAF1Q5TC12 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATPAF1Q5TC12 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
ATPAF1Q5TC12 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATPAF1Q5TC12 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
ATPAF1Q5TC12 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
ATPAF1Q5TC12 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms