Protein–RNA interactions for Protein: Q53T59

HS1BP3, HCLS1-binding protein 3, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS1BP3Q53T59 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
HS1BP3Q53T59 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HS1BP3Q53T59 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 AC021242.3-201ENST00000607598 1377 ntBASIC23.28■■□□□ 1.32
HS1BP3Q53T59 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 AC079089.2-201ENST00000531211 1277 ntBASIC23.28■■□□□ 1.32
HS1BP3Q53T59 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 AC007225.1-201ENST00000566331 1836 ntBASIC23.28■■□□□ 1.32
HS1BP3Q53T59 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
HS1BP3Q53T59 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.27■■□□□ 1.32
HS1BP3Q53T59 AC026471.1-201ENST00000564629 3026 ntBASIC23.27■■□□□ 1.32
HS1BP3Q53T59 PEMT-206ENST00000435340 960 ntTSL 5 BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
HS1BP3Q53T59 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC23.27■■□□□ 1.31
HS1BP3Q53T59 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 AC004408.2-201ENST00000623613 2777 ntBASIC23.26■■□□□ 1.31
HS1BP3Q53T59 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.26■■□□□ 1.31
HS1BP3Q53T59 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 AC092028.1-203ENST00000608262 953 ntBASIC23.25■■□□□ 1.31
HS1BP3Q53T59 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HS1BP3Q53T59 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.24■■□□□ 1.31
HS1BP3Q53T59 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC23.23■■□□□ 1.31
HS1BP3Q53T59 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HS1BP3Q53T59 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
HS1BP3Q53T59 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.23■■□□□ 1.31
HS1BP3Q53T59 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms