Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 AL157400.5-201ENST00000507624 621 ntBASIC10.45□□□□□ -0.74
LINC01554Q52M75 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC10.45□□□□□ -0.74
LINC01554Q52M75 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
LINC01554Q52M75 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 MACF1-219ENST00000484793 834 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 AC060814.1-201ENST00000554326 538 ntBASIC10.44□□□□□ -0.74
LINC01554Q52M75 AC022413.1-201ENST00000624602 984 ntBASIC10.44□□□□□ -0.74
LINC01554Q52M75 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
LINC01554Q52M75 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 RP9P-202ENST00000450133 1212 ntBASIC10.43□□□□□ -0.74
LINC01554Q52M75 PVT1-219ENST00000523427 938 ntTSL 3 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 AC093536.1-201ENST00000569153 554 ntBASIC10.43□□□□□ -0.74
LINC01554Q52M75 BX323043.1-201ENST00000641006 1765 ntBASIC10.43□□□□□ -0.74
LINC01554Q52M75 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 BOC-212ENST00000485230 2173 ntTSL 2 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC10.43□□□□□ -0.74
LINC01554Q52M75 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
LINC01554Q52M75 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC10.43□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms