Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 DROSHA-202ENST00000442743 4991 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.098e-10■■■□□ 16.6
SRSF1Q07955 DROSHA-220ENST00000513349 4681 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.228e-10■■■□□ 16.6
SRSF1Q07955 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.618e-10■■■□□ 16.6
SRSF1Q07955 TRAPPC8-213ENST00000584876 715 ntTSL 522.67■■□□□ 1.221e-6■■■□□ 16.6
SRSF1Q07955 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.48□□□□□ -0.411e-6■■■□□ 16.6
SRSF1Q07955 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.471e-6■■■□□ 16.6
SRSF1Q07955 TRAPPC8-207ENST00000580104 5014 ntTSL 210.93□□□□□ -0.661e-6■■■□□ 16.6
SRSF1Q07955 TRAPPC8-211ENST00000582539 4391 ntTSL 1 (best) BASIC7.81□□□□□ -1.161e-6■■■□□ 16.6
SRSF1Q07955 TRAPPC8-202ENST00000577426 437 ntTSL 55.5□□□□□ -1.531e-6■■■□□ 16.6
SRSF1Q07955 NCL-205ENST00000453992 964 ntTSL 417.38■□□□□ 0.371e-32■■■□□ 16.6
SRSF1Q07955 NCL-204ENST00000436894 562 ntTSL 44.56□□□□□ -1.681e-32■■■□□ 16.6
SRSF1Q07955 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC12.76□□□□□ -0.371e-6■■■□□ 16.6
SRSF1Q07955 ELP2-225ENST00000544267 553 ntTSL 413.21□□□□□ -0.299e-7■■■□□ 16.6
SRSF1Q07955 ELP2-228ENST00000545632 569 ntTSL 412.13□□□□□ -0.479e-7■■■□□ 16.6
SRSF1Q07955 ELP2-211ENST00000540135 575 ntTSL 311.87□□□□□ -0.519e-7■■■□□ 16.6
SRSF1Q07955 ELP2-220ENST00000542430 649 ntTSL 510.71□□□□□ -0.699e-7■■■□□ 16.6
SRSF1Q07955 ELP2-207ENST00000535488 692 ntTSL 210.49□□□□□ -0.739e-7■■■□□ 16.6
SRSF1Q07955 ELP2-215ENST00000540799 381 ntTSL 310.33□□□□□ -0.769e-7■■■□□ 16.6
SRSF1Q07955 ELP2-222ENST00000543127 535 ntTSL 49.15□□□□□ -0.949e-7■■■□□ 16.6
SRSF1Q07955 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.35e-7■■■□□ 16.6
SRSF1Q07955 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC11.35□□□□□ -0.595e-7■■■□□ 16.6
SRSF1Q07955 METTL3-211ENST00000544248 1570 ntTSL 511.77□□□□□ -0.531e-6■■■□□ 16.6
SRSF1Q07955 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.041e-7■■■□□ 16.6
SRSF1Q07955 GIGYF2-203ENST00000409451 5937 ntTSL 1 (best) BASIC8□□□□□ -1.131e-7■■■□□ 16.6
SRSF1Q07955 GIGYF2-205ENST00000409547 5978 ntTSL 1 (best) BASIC7.69□□□□□ -1.181e-7■■■□□ 16.6
SRSF1Q07955 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC7.59□□□□□ -1.191e-7■■■□□ 16.6
SRSF1Q07955 GIGYF2-201ENST00000373563 5847 ntTSL 1 (best) BASIC7.32□□□□□ -1.241e-7■■■□□ 16.6
SRSF1Q07955 GIGYF2-231ENST00000474312 4687 ntTSL 25.63□□□□□ -1.511e-7■■■□□ 16.6
SRSF1Q07955 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC5.39□□□□□ -1.551e-7■■■□□ 16.6
SRSF1Q07955 GSE1-207ENST00000469381 5885 ntTSL 29.61□□□□□ -0.873e-6■■■□□ 16.6
SRSF1Q07955 TTC17-201ENST00000039989 4469 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.055e-6■■■□□ 16.6
SRSF1Q07955 AC013394.1-202ENST00000630790 4499 ntTSL 26.88□□□□□ -1.312e-8■■■□□ 16.6
SRSF1Q07955 PHF19-202ENST00000373896 4241 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.762e-6■■■□□ 16.6
SRSF1Q07955 PHF19-214ENST00000616568 4159 ntTSL 1 (best) BASIC7.59□□□□□ -1.192e-6■■■□□ 16.6
SRSF1Q07955 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.38■□□□□ 0.372e-6■■■□□ 16.6
SRSF1Q07955 UBA5-209ENST00000480955 894 ntTSL 220.55■□□□□ 0.886e-9■■■□□ 16.5
SRSF1Q07955 UBA5-204ENST00000464101 570 ntTSL 220.16■□□□□ 0.826e-9■■■□□ 16.5
SRSF1Q07955 UBA5-214ENST00000505777 576 ntTSL 419.95■□□□□ 0.786e-9■■■□□ 16.5
SRSF1Q07955 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.13■□□□□ 0.656e-9■■■□□ 16.5
SRSF1Q07955 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.09■□□□□ 0.336e-9■■■□□ 16.5
SRSF1Q07955 UBA5-205ENST00000468022 662 ntTSL 514.51□□□□□ -0.096e-9■■■□□ 16.5
SRSF1Q07955 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC11.96□□□□□ -0.496e-9■■■□□ 16.5
SRSF1Q07955 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.636e-9■■■□□ 16.5
SRSF1Q07955 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.39□□□□□ -1.876e-9■■■□□ 16.5
SRSF1Q07955 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.23■□□□□ 0.032e-6■■■□□ 16.5
SRSF1Q07955 CLCN7-204ENST00000561665 561 ntTSL 421.13■□□□□ 0.975e-6■■■□□ 16.5
SRSF1Q07955 CLCN7-211ENST00000567139 581 ntTSL 219.27■□□□□ 0.685e-6■■■□□ 16.5
SRSF1Q07955 CLCN7-207ENST00000564568 533 ntTSL 48.69□□□□□ -1.025e-6■■■□□ 16.5
SRSF1Q07955 LRPPRC-207ENST00000467058 557 ntTSL 35.65□□□□□ -1.52e-7■■■□□ 16.5
SRSF1Q07955 UBA6-205ENST00000506571 385 ntTSL 218.38■□□□□ 0.534e-8■■■□□ 16.5
SRSF1Q07955 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.62□□□□□ -0.394e-8■■■□□ 16.5
SRSF1Q07955 UBA6-203ENST00000429659 2387 ntTSL 211.02□□□□□ -0.654e-8■■■□□ 16.5
SRSF1Q07955 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.884e-8■■■□□ 16.5
SRSF1Q07955 RANGAP1-201ENST00000356244 3060 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.851e-8■■■□□ 16.5
SRSF1Q07955 NCL-209ENST00000484328 369 ntTSL 25.68□□□□□ -1.52e-32■■■□□ 16.5
SRSF1Q07955 DAPK1-215ENST00000495182 626 ntTSL 518.97■□□□□ 0.639e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-208ENST00000470267 579 ntTSL 218.43■□□□□ 0.549e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-217ENST00000496522 579 ntTSL 214.66□□□□□ -0.069e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC14.3□□□□□ -0.129e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.199e-10■■■□□ 16.5
SRSF1Q07955 DROSHA-218ENST00000512302 585 ntTSL 413.41□□□□□ -0.269e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-210ENST00000472344 548 ntTSL 513.2□□□□□ -0.39e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-206ENST00000469067 2499 ntTSL 212.71□□□□□ -0.379e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.759e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-213ENST00000491893 4186 ntTSL 1 (best) BASIC9.45□□□□□ -0.99e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-219ENST00000622514 5772 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.929e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-209ENST00000472284 5759 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.959e-10■■■□□ 16.5
SRSF1Q07955 DROSHA-215ENST00000512076 1124 ntTSL 1 (best)7.73□□□□□ -1.179e-10■■■□□ 16.5
SRSF1Q07955 DAPK1-212ENST00000489291 4334 ntTSL 1 (best)7.48□□□□□ -1.219e-10■■■□□ 16.5
SRSF1Q07955 ARL15-203ENST00000505383 536 ntTSL 38.25□□□□□ -1.091e-13■■■□□ 16.5
SRSF1Q07955 IARS-208ENST00000472894 651 ntTSL 37.04□□□□□ -1.281e-6■■■□□ 16.5
SRSF1Q07955 NINL-206ENST00000489780 630 ntTSL 318.82■□□□□ 0.61e-7■■■□□ 16.5
SRSF1Q07955 METTL26-206ENST00000448973 1710 ntTSL 1 (best)20.47■□□□□ 0.876e-8■■■□□ 16.5
SRSF1Q07955 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.93■□□□□ 0.786e-8■■■□□ 16.5
SRSF1Q07955 METTL26-211ENST00000568077 588 ntTSL 317.95■□□□□ 0.466e-8■■■□□ 16.5
SRSF1Q07955 METTL26-209ENST00000565163 485 ntTSL 317.94■□□□□ 0.466e-8■■■□□ 16.5
SRSF1Q07955 METTL26-212ENST00000568773 499 ntTSL 216.78■□□□□ 0.286e-8■■■□□ 16.5
SRSF1Q07955 METTL26-208ENST00000564039 518 ntTSL 216.45■□□□□ 0.226e-8■■■□□ 16.5
SRSF1Q07955 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.25■□□□□ 0.196e-8■■■□□ 16.5
SRSF1Q07955 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.176e-8■■■□□ 16.5
SRSF1Q07955 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.13■□□□□ 0.176e-8■■■□□ 16.5
SRSF1Q07955 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.55■□□□□ 0.086e-8■■■□□ 16.5
SRSF1Q07955 METTL26-207ENST00000456420 755 ntTSL 315.51■□□□□ 0.076e-8■■■□□ 16.5
SRSF1Q07955 METTL26-214ENST00000614890 801 ntTSL 3 BASIC14.05□□□□□ -0.166e-8■■■□□ 16.5
SRSF1Q07955 COL4A5-201ENST00000328300 6483 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.935e-6■■■□□ 16.5
SRSF1Q07955 COL4A5-202ENST00000361603 6469 ntAPPRIS P3 TSL 2 BASIC9.25□□□□□ -0.935e-6■■■□□ 16.5
SRSF1Q07955 COL4A5-205ENST00000483338 3622 ntTSL 1 (best)6.41□□□□□ -1.385e-6■■■□□ 16.5
SRSF1Q07955 ILF3-216ENST00000589600 839 ntTSL 522.46■■□□□ 1.198e-12■■■□□ 16.4
SRSF1Q07955 ILF3-207ENST00000587840 655 ntTSL 515.66■□□□□ 0.18e-12■■■□□ 16.4
SRSF1Q07955 ILF3-206ENST00000587505 791 ntTSL 515.25■□□□□ 0.038e-12■■■□□ 16.4
SRSF1Q07955 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC15.25■□□□□ 0.032e-10■■■□□ 16.4
SRSF1Q07955 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.122e-10■■■□□ 16.4
SRSF1Q07955 ILF3-214ENST00000589416 773 ntTSL 413.87□□□□□ -0.198e-12■■■□□ 16.4
SRSF1Q07955 ILF3-209ENST00000587941 533 ntTSL 212.72□□□□□ -0.378e-12■■■□□ 16.4
SRSF1Q07955 ILF3-218ENST00000590009 953 ntTSL 512.46□□□□□ -0.418e-12■■■□□ 16.4
SRSF1Q07955 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.482e-10■■■□□ 16.4
SRSF1Q07955 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC10.27□□□□□ -0.772e-10■■■□□ 16.4
SRSF1Q07955 ILF3-219ENST00000590261 3219 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.772e-10■■■□□ 16.4
SRSF1Q07955 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC9.94□□□□□ -0.822e-10■■■□□ 16.4
SRSF1Q07955 ILF3-208ENST00000587928 4230 ntTSL 28.7□□□□□ -1.022e-10■■■□□ 16.4
Retrieved 100 of 14,836 protein–RNA pairs in 100.4 ms