RNA–Protein interactions for RNA: ENST00000474312.5

GIGYF2-231, Transcript of GRB10 interacting GYF protein 2, human

TSL 2

Gene GIGYF2, Length 4,687 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GIGYF2-231	ENST00000474312	DCAF8L2	P0C7V8	631 aa		12.65	□□□□□ -0.38
GIGYF2-231	ENST00000474312	NISCH	Q9Y2I1	1504 aa		12.34	□□□□□ -0.43
GIGYF2-231	ENST00000474312	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.67	□□□□□ -0.54
GIGYF2-231	ENST00000474312	SUPT5H	O00267	1087 aa	Known RBP	11.5	□□□□□ -0.57
GIGYF2-231	ENST00000474312	SHROOM4	Q9ULL8	1493 aa		11.35	□□□□□ -0.59
GIGYF2-231	ENST00000474312	APLP2	Q06481	763 aa		11.26	□□□□□ -0.61
GIGYF2-231	ENST00000474312	ABCC9	O60706	1549 aa		10.92	□□□□□ -0.66
GIGYF2-231	ENST00000474312	EHMT2	Q96KQ7	1210 aa		10.87	□□□□□ -0.67
GIGYF2-231	ENST00000474312	TRIM41	Q8WV44	630 aa		10.86	□□□□□ -0.67
GIGYF2-231	ENST00000474312	HRC	P23327	699 aa		10.83	□□□□□ -0.68
GIGYF2-231	ENST00000474312	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.83	□□□□□ -0.68
GIGYF2-231	ENST00000474312	UBTF	P17480	764 aa	Known RBP	10.77	□□□□□ -0.69
GIGYF2-231	ENST00000474312	PCGF6	Q9BYE7	350 aa		10.73	□□□□□ -0.69
GIGYF2-231	ENST00000474312	PABPN1	Q86U42	306 aa	Known RBP eCLIP	10.71	□□□□□ -0.69
GIGYF2-231	ENST00000474312	PELP1	Q8IZL8	1130 aa	Known RBP	10.71	□□□□□ -0.69
GIGYF2-231	ENST00000474312	MYT1L	Q9UL68	1186 aa		10.7	□□□□□ -0.7
GIGYF2-231	ENST00000474312	RANGAP1	P46060	587 aa	Predicted RBP	10.69	□□□□□ -0.7
GIGYF2-231	ENST00000474312	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	10.67	□□□□□ -0.7
GIGYF2-231	ENST00000474312	HNRNPUL2	Q1KMD3	747 aa	Known RBP	10.67	□□□□□ -0.7
GIGYF2-231	ENST00000474312	CCDC180	Q9P1Z9	1646 aa		10.53	□□□□□ -0.72
GIGYF2-231	ENST00000474312	ZEB1	P37275	1124 aa	Predicted RBP	10.53	□□□□□ -0.72
GIGYF2-231	ENST00000474312	CHIC1	Q5VXU3	224 aa		10.53	□□□□□ -0.72
GIGYF2-231	ENST00000474312	TTBK1	Q5TCY1	1321 aa	Predicted RBP	10.52	□□□□□ -0.73
GIGYF2-231	ENST00000474312	PPARGC1B	Q86YN6	1023 aa	Known RBP	10.49	□□□□□ -0.73
GIGYF2-231	ENST00000474312	FBLN2	P98095	1184 aa		10.45	□□□□□ -0.74
GIGYF2-231	ENST00000474312	TRIM26	Q12899	539 aa	Predicted RBP	10.43	□□□□□ -0.74
GIGYF2-231	ENST00000474312	MYT1	Q01538	1121 aa		10.41	□□□□□ -0.74
GIGYF2-231	ENST00000474312	NPM1	P06748	294 aa	Known RBP eCLIP	10.4	□□□□□ -0.74
GIGYF2-231	ENST00000474312	RB1CC1	Q8TDY2	1594 aa		10.39	□□□□□ -0.75
GIGYF2-231	ENST00000474312	DCAF1	Q9Y4B6	1507 aa		10.36	□□□□□ -0.75
GIGYF2-231	ENST00000474312	MYO15B	Q96JP2	1530 aa		10.34	□□□□□ -0.75
GIGYF2-231	ENST00000474312	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.31	□□□□□ -0.76
GIGYF2-231	ENST00000474312	CCER1	Q8TC90	406 aa	Predicted RBP	10.3	□□□□□ -0.76
GIGYF2-231	ENST00000474312	ESF1	Q9H501	851 aa	Known RBP	10.3	□□□□□ -0.76
GIGYF2-231	ENST00000474312	SCRIB	Q14160	1630 aa		10.29	□□□□□ -0.76
GIGYF2-231	ENST00000474312	LOC105371045	A0A1W2PR82	267 aa		10.27	□□□□□ -0.76
GIGYF2-231	ENST00000474312	ZCCHC6	Q5VYS8	1495 aa	Known RBP	10.27	□□□□□ -0.77
GIGYF2-231	ENST00000474312	NACAD	O15069	1562 aa		10.26	□□□□□ -0.77
GIGYF2-231	ENST00000474312	CENPB	P07199	599 aa	Predicted RBP	10.25	□□□□□ -0.77
GIGYF2-231	ENST00000474312	ITGAE	P38570	1179 aa		10.19	□□□□□ -0.78
GIGYF2-231	ENST00000474312	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.15	□□□□□ -0.79
GIGYF2-231	ENST00000474312	AEBP2	Q6ZN18	517 aa	Predicted RBP	10.13	□□□□□ -0.79
GIGYF2-231	ENST00000474312	FAM50A	Q14320	339 aa	Known RBP	10.11	□□□□□ -0.79
GIGYF2-231	ENST00000474312	BCAN	Q96GW7	911 aa		10.11	□□□□□ -0.79
GIGYF2-231	ENST00000474312	SCAF1	Q9H7N4	1312 aa	Known RBP	10.11	□□□□□ -0.79
GIGYF2-231	ENST00000474312	SLC4A1AP	Q9BWU0	796 aa	Known RBP	10.1	□□□□□ -0.79
GIGYF2-231	ENST00000474312	ERCC6	Q03468	1493 aa		10.09	□□□□□ -0.79
GIGYF2-231	ENST00000474312	TRIM52	Q96A61	297 aa		10.09	□□□□□ -0.79
GIGYF2-231	ENST00000474312	CSRNP3	Q8WYN3	585 aa		10.06	□□□□□ -0.8
GIGYF2-231	ENST00000474312	POLR3GL	Q9BT43	218 aa		10.06	□□□□□ -0.8
GIGYF2-231	ENST00000474312	ACIN1	Q9UKV3	1341 aa	Known RBP	10.05	□□□□□ -0.8
GIGYF2-231	ENST00000474312	NEFL	P07196	543 aa		10.05	□□□□□ -0.8
GIGYF2-231	ENST00000474312	STAG3	Q9UJ98	1225 aa		10.04	□□□□□ -0.8
GIGYF2-231	ENST00000474312	SLC24A1	O60721	1099 aa		10.02	□□□□□ -0.8
GIGYF2-231	ENST00000474312	BAZ1B	Q9UIG0	1483 aa	Known RBP	9.99	□□□□□ -0.81
GIGYF2-231	ENST00000474312	GTF3C3	Q9Y5Q9	886 aa		9.99	□□□□□ -0.81
GIGYF2-231	ENST00000474312	DIEXF	Q68CQ4	756 aa	Known RBP	9.98	□□□□□ -0.81
GIGYF2-231	ENST00000474312	ZNF777	Q9ULD5	760 aa	Predicted RBP	9.98	□□□□□ -0.81
GIGYF2-231	ENST00000474312	NEFM	P07197	916 aa		9.96	□□□□□ -0.81
GIGYF2-231	ENST00000474312	P3H3	Q8IVL6	736 aa		9.95	□□□□□ -0.82
GIGYF2-231	ENST00000474312	TSPY4	P0CV99	314 aa		9.94	□□□□□ -0.82
GIGYF2-231	ENST00000474312	TSPY10	P0CW01	314 aa		9.94	□□□□□ -0.82
GIGYF2-231	ENST00000474312	ARID3C	A6NKF2	412 aa		9.91	□□□□□ -0.82
GIGYF2-231	ENST00000474312	NEUROD1	Q13562	356 aa		9.91	□□□□□ -0.82
GIGYF2-231	ENST00000474312	YTHDC1	Q96MU7	727 aa	Known RBP	9.91	□□□□□ -0.82
GIGYF2-231	ENST00000474312	PDS5B	Q9NTI5	1447 aa		9.9	□□□□□ -0.82
GIGYF2-231	ENST00000474312	PLEKHD1	A6NEE1	506 aa		9.9	□□□□□ -0.83
GIGYF2-231	ENST00000474312	TRH	P20396	242 aa	Predicted RBP	9.88	□□□□□ -0.83
GIGYF2-231	ENST00000474312	CHGA	P10645	457 aa	Known RBP	9.86	□□□□□ -0.83
GIGYF2-231	ENST00000474312	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	9.85	□□□□□ -0.83
GIGYF2-231	ENST00000474312	ERICH6	Q7L0X2	663 aa		9.85	□□□□□ -0.83
GIGYF2-231	ENST00000474312	PLPPR3	Q6T4P5	718 aa		9.84	□□□□□ -0.83
GIGYF2-231	ENST00000474312	ARID4B	Q4LE39	1312 aa	Predicted RBP	9.84	□□□□□ -0.83
GIGYF2-231	ENST00000474312	ZNF326	Q5BKZ1	582 aa	Known RBP	9.83	□□□□□ -0.84
GIGYF2-231	ENST00000474312	EEA1	Q15075	1411 aa		9.83	□□□□□ -0.84
GIGYF2-231	ENST00000474312	MTUS2	Q5JR59	1369 aa		9.81	□□□□□ -0.84
GIGYF2-231	ENST00000474312	RSF1	Q96T23	1441 aa	Predicted RBP	9.81	□□□□□ -0.84
GIGYF2-231	ENST00000474312	KIF27	Q86VH2	1401 aa		9.81	□□□□□ -0.84
GIGYF2-231	ENST00000474312	ZNF316	A6NFI3	1004 aa	Predicted RBP	9.81	□□□□□ -0.84
GIGYF2-231	ENST00000474312	ZBTB47	Q9UFB7	747 aa	Predicted RBP	9.79	□□□□□ -0.84
GIGYF2-231	ENST00000474312	SMARCA2	P51531	1590 aa		9.78	□□□□□ -0.84
GIGYF2-231	ENST00000474312	PPP1R15A	O75807	674 aa	Predicted RBP	9.78	□□□□□ -0.84
GIGYF2-231	ENST00000474312	KCNH8	Q96L42	1107 aa		9.78	□□□□□ -0.84
GIGYF2-231	ENST00000474312	WRN	Q14191	1432 aa	Predicted RBP eCLIP	9.77	□□□□□ -0.85
GIGYF2-231	ENST00000474312	DAXX	Q9UER7	740 aa	Predicted RBP	9.76	□□□□□ -0.85
GIGYF2-231	ENST00000474312	CECR2	Q9BXF3	1484 aa		9.75	□□□□□ -0.85
GIGYF2-231	ENST00000474312	C14orf37	Q86TY3	774 aa		9.75	□□□□□ -0.85
GIGYF2-231	ENST00000474312	HDGF	P51858	240 aa	Known RBP	9.74	□□□□□ -0.85
GIGYF2-231	ENST00000474312	CNGB1	Q14028	1251 aa	Predicted RBP	9.73	□□□□□ -0.85
GIGYF2-231	ENST00000474312	CARMIL2	Q6F5E8	1435 aa		9.73	□□□□□ -0.85
GIGYF2-231	ENST00000474312	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	9.72	□□□□□ -0.85	2e-11	■■■□□ 16.4
GIGYF2-231	ENST00000474312	CLSPN	Q9HAW4	1339 aa		9.71	□□□□□ -0.86
GIGYF2-231	ENST00000474312	NPM2	Q86SE8	214 aa	Known RBP	9.71	□□□□□ -0.86
GIGYF2-231	ENST00000474312	HAP1	P54257	671 aa	Predicted RBP	9.68	□□□□□ -0.86
GIGYF2-231	ENST00000474312	CFDP1	Q9UEE9	299 aa	Predicted RBP	9.68	□□□□□ -0.86
GIGYF2-231	ENST00000474312	ANP32C	O43423	234 aa		9.65	□□□□□ -0.86
GIGYF2-231	ENST00000474312	TONSL	Q96HA7	1378 aa		9.65	□□□□□ -0.86
GIGYF2-231	ENST00000474312	CADPS	Q9ULU8	1353 aa		9.64	□□□□□ -0.87
GIGYF2-231	ENST00000474312	CEP164	Q9UPV0	1460 aa		9.64	□□□□□ -0.87
GIGYF2-231	ENST00000474312	OSCAR	Q8IYS5	282 aa		9.64	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms