Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPS28P62857 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC12.23□□□□□ -0.45
RPS28P62857 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC12.23□□□□□ -0.45
RPS28P62857 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
RPS28P62857 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPS28P62857 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPS28P62857 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
RPS28P62857 AC079630.1-202ENST00000618127 1840 ntBASIC12.23□□□□□ -0.45
RPS28P62857 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC12.22□□□□□ -0.45
RPS28P62857 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC12.22□□□□□ -0.45
RPS28P62857 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
RPS28P62857 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
RPS28P62857 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
RPS28P62857 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
RPS28P62857 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC12.22□□□□□ -0.45
RPS28P62857 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC12.22□□□□□ -0.45
RPS28P62857 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
RPS28P62857 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
RPS28P62857 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
RPS28P62857 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC12.22□□□□□ -0.45
RPS28P62857 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
RPS28P62857 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
RPS28P62857 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
RPS28P62857 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC12.21□□□□□ -0.45
RPS28P62857 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC12.21□□□□□ -0.45
RPS28P62857 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.21□□□□□ -0.45
RPS28P62857 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.21□□□□□ -0.45
RPS28P62857 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC12.21□□□□□ -0.45
RPS28P62857 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.21□□□□□ -0.45
RPS28P62857 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.21□□□□□ -0.46
RPS28P62857 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
RPS28P62857 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC12.21□□□□□ -0.46
RPS28P62857 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.46
RPS28P62857 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
RPS28P62857 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RPS28P62857 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
RPS28P62857 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RPS28P62857 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
RPS28P62857 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RPS28P62857 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
RPS28P62857 AC103702.1-201ENST00000548801 2630 ntBASIC12.2□□□□□ -0.46
RPS28P62857 AC084018.2-201ENST00000613093 2607 ntBASIC12.2□□□□□ -0.46
RPS28P62857 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC12.2□□□□□ -0.46
RPS28P62857 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC12.2□□□□□ -0.46
RPS28P62857 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC12.2□□□□□ -0.46
RPS28P62857 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
RPS28P62857 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC12.19□□□□□ -0.46
RPS28P62857 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
RPS28P62857 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
RPS28P62857 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms