Protein–RNA interactions for Protein: P61165

TMEM258, Transmembrane protein 258, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258P61165 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TMEM258P61165 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM258P61165 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 BID-204ENST00000399767 2129 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM258P61165 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM258P61165 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC12.59□□□□□ -0.39
TMEM258P61165 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TMEM258P61165 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM258P61165 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC12.58□□□□□ -0.39
TMEM258P61165 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
TMEM258P61165 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TMEM258P61165 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM258P61165 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TMEM258P61165 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 TNRC18P3-201ENST00000441896 2691 ntBASIC12.58□□□□□ -0.4
TMEM258P61165 HLA-L-211ENST00000482052 1765 ntBASIC12.58□□□□□ -0.4
TMEM258P61165 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 PCDHAC2-203ENST00000615316 3011 ntBASIC12.58□□□□□ -0.4
TMEM258P61165 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC12.58□□□□□ -0.4
TMEM258P61165 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC12.58□□□□□ -0.4
TMEM258P61165 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
TMEM258P61165 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TMEM258P61165 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC12.57□□□□□ -0.4
TMEM258P61165 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM258P61165 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.57□□□□□ -0.4
TMEM258P61165 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
TMEM258P61165 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC12.57□□□□□ -0.4
TMEM258P61165 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TMEM258P61165 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TMEM258P61165 AC141586.5-201ENST00000624546 2050 ntBASIC12.57□□□□□ -0.4
TMEM258P61165 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TMEM258P61165 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TMEM258P61165 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM258P61165 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM258P61165 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM258P61165 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC12.56□□□□□ -0.4
TMEM258P61165 GABARAPL3-202ENST00000624044 1851 ntBASIC12.56□□□□□ -0.4
TMEM258P61165 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.56□□□□□ -0.4
TMEM258P61165 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TMEM258P61165 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TMEM258P61165 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TMEM258P61165 AL391005.1-201ENST00000623953 2435 ntBASIC12.56□□□□□ -0.4
TMEM258P61165 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.56□□□□□ -0.4
TMEM258P61165 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TMEM258P61165 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms