Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDC42P60953 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.02■□□□□ 0.63
CDC42P60953 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.02■□□□□ 0.63
CDC42P60953 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CDC42P60953 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.02■□□□□ 0.63
CDC42P60953 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.02■□□□□ 0.63
CDC42P60953 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC42P60953 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC42P60953 AC027702.1-201ENST00000563810 1770 ntBASIC19.01■□□□□ 0.63
CDC42P60953 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDC42P60953 PCDHAC2-203ENST00000615316 3011 ntBASIC19.01■□□□□ 0.63
CDC42P60953 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CDC42P60953 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDC42P60953 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC42P60953 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC42P60953 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CDC42P60953 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.01■□□□□ 0.63
CDC42P60953 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 AC020907.5-201ENST00000624372 1936 ntBASIC19.01■□□□□ 0.63
CDC42P60953 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDC42P60953 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CDC42P60953 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDC42P60953 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDC42P60953 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19■□□□□ 0.63
CDC42P60953 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CDC42P60953 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
CDC42P60953 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19■□□□□ 0.63
CDC42P60953 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19■□□□□ 0.63
CDC42P60953 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19■□□□□ 0.63
CDC42P60953 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CDC42P60953 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19■□□□□ 0.63
CDC42P60953 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19■□□□□ 0.63
CDC42P60953 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19■□□□□ 0.63
CDC42P60953 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDC42P60953 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDC42P60953 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC42P60953 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC42P60953 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.99■□□□□ 0.63
CDC42P60953 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDC42P60953 AFG3L1P-217ENST00000557444 2447 ntBASIC18.99■□□□□ 0.63
CDC42P60953 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDC42P60953 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC42P60953 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDC42P60953 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC42P60953 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC42P60953 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC42P60953 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.99■□□□□ 0.63
CDC42P60953 AC010525.1-201ENST00000585559 441 ntBASIC18.99■□□□□ 0.63
CDC42P60953 AC007225.1-201ENST00000566331 1836 ntBASIC18.99■□□□□ 0.63
CDC42P60953 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.99■□□□□ 0.63
CDC42P60953 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
CDC42P60953 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42P60953 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42P60953 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDC42P60953 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
CDC42P60953 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.98■□□□□ 0.63
CDC42P60953 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42P60953 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42P60953 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42P60953 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.98■□□□□ 0.63
CDC42P60953 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.98■□□□□ 0.63
CDC42P60953 AC092171.4-201ENST00000609130 632 ntBASIC18.98■□□□□ 0.63
CDC42P60953 GATM-206ENST00000558336 1522 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC42P60953 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDC42P60953 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.98■□□□□ 0.63
CDC42P60953 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CDC42P60953 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CDC42P60953 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDC42P60953 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDC42P60953 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms