Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
CLNS1AP54105 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CLNS1AP54105 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
CLNS1AP54105 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.62■□□□□ 0.89
CLNS1AP54105 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CLNS1AP54105 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.62■□□□□ 0.89
CLNS1AP54105 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.62■□□□□ 0.89
CLNS1AP54105 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.62■□□□□ 0.89
CLNS1AP54105 KRT16P3-201ENST00000439127 1283 ntBASIC20.62■□□□□ 0.89
CLNS1AP54105 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.62■□□□□ 0.89
CLNS1AP54105 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CLNS1AP54105 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
CLNS1AP54105 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLNS1AP54105 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
CLNS1AP54105 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CLNS1AP54105 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.61■□□□□ 0.89
CLNS1AP54105 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 AC018445.3-201ENST00000624177 1945 ntBASIC20.61■□□□□ 0.89
CLNS1AP54105 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CLNS1AP54105 AC079089.2-201ENST00000531211 1277 ntBASIC20.61■□□□□ 0.89
CLNS1AP54105 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.61■□□□□ 0.89
CLNS1AP54105 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLNS1AP54105 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.61■□□□□ 0.89
CLNS1AP54105 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLNS1AP54105 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.6■□□□□ 0.89
CLNS1AP54105 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.6■□□□□ 0.89
CLNS1AP54105 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.6■□□□□ 0.89
CLNS1AP54105 pRNA.6-201ENST00000610482 90 ntBASIC20.6■□□□□ 0.89
CLNS1AP54105 pRNA.5-201ENST00000612139 90 ntBASIC20.6■□□□□ 0.89
CLNS1AP54105 pRNA.11-201ENST00000618423 90 ntBASIC20.6■□□□□ 0.89
CLNS1AP54105 pRNA.13-201ENST00000619112 90 ntBASIC20.6■□□□□ 0.89
CLNS1AP54105 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLNS1AP54105 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLNS1AP54105 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLNS1AP54105 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLNS1AP54105 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC20.59■□□□□ 0.89
CLNS1AP54105 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.59■□□□□ 0.89
CLNS1AP54105 FEM1AP4-201ENST00000443167 1987 ntBASIC20.59■□□□□ 0.89
CLNS1AP54105 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.59■□□□□ 0.89
CLNS1AP54105 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.59■□□□□ 0.89
CLNS1AP54105 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.59■□□□□ 0.89
CLNS1AP54105 AC068587.7-201ENST00000641602 218 ntBASIC20.59■□□□□ 0.89
CLNS1AP54105 PCDHAC2-203ENST00000615316 3011 ntBASIC20.59■□□□□ 0.89
CLNS1AP54105 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLNS1AP54105 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.58■□□□□ 0.89
CLNS1AP54105 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CLNS1AP54105 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.89
CLNS1AP54105 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLNS1AP54105 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms