Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 SLN1YIL147C 3663 nt2.53□□□□□ -2
YNL040WP53960 STE11YLR362W 2154 nt2.53□□□□□ -2
YNL040WP53960 SLS1YLR139C 1932 nt2.53□□□□□ -2
YNL040WP53960 DIG2YDR480W 972 nt2.53□□□□□ -2
YNL040WP53960 YEL010WYEL010W 351 nt2.53□□□□□ -2
YNL040WP53960 YGL117WYGL117W 798 nt2.53□□□□□ -2
YNL040WP53960 UPF3YGR072W 1164 nt2.53□□□□□ -2
YNL040WP53960 MRPL9YGR220C 810 nt2.53□□□□□ -2
YNL040WP53960 PAU23YLR037C 375 nt2.53□□□□□ -2
YNL040WP53960 NEJ1YLR265C 1029 nt2.53□□□□□ -2
YNL040WP53960 SUB1YMR039C 879 nt2.53□□□□□ -2
YNL040WP53960 SAS2YMR127C 1017 nt2.53□□□□□ -2
YNL040WP53960 TYE7YOR344C 876 nt2.53□□□□□ -2
YNL040WP53960 PEX5YDR244W 1839 nt2.52□□□□□ -2.01
YNL040WP53960 YNL011CYNL011C 1335 nt2.52□□□□□ -2.01
YNL040WP53960 APC11YDL008W 498 nt2.52□□□□□ -2.01
YNL040WP53960 RPL22BYFL034C-A 369 nt2.52□□□□□ -2.01
YNL040WP53960 GEP7YGL057C 864 nt2.52□□□□□ -2.01
YNL040WP53960 CCE1YKL011C 1062 nt2.52□□□□□ -2.01
YNL040WP53960 YLR154W-EYLR154W-E 204 nt2.52□□□□□ -2.01
YNL040WP53960 YLR257WYLR257W 966 nt2.52□□□□□ -2.01
YNL040WP53960 DLT1YMR126C 1029 nt2.52□□□□□ -2.01
YNL040WP53960 KTI11YBL071W-A 249 nt2.52□□□□□ -2.01
YNL040WP53960 KAR4YCL055W 1008 nt2.52□□□□□ -2.01
YNL040WP53960 TAF2YCR042C 4224 nt2.52□□□□□ -2.01
YNL040WP53960 YDR186CYDR186C 2634 nt2.52□□□□□ -2.01
YNL040WP53960 HMO1YDR174W 741 nt2.51□□□□□ -2.01
YNL040WP53960 DPP1YDR284C 870 nt2.51□□□□□ -2.01
YNL040WP53960 MFA1YDR461W 111 nt2.51□□□□□ -2.01
YNL040WP53960 YFH7YFR007W 1062 nt2.51□□□□□ -2.01
YNL040WP53960 YKL131WYKL131W 522 nt2.51□□□□□ -2.01
YNL040WP53960 DAD2YKR083C 402 nt2.51□□□□□ -2.01
YNL040WP53960 KHA1YJL094C 2622 nt2.51□□□□□ -2.01
YNL040WP53960 MET6YER091C 2304 nt2.51□□□□□ -2.01
YNL040WP53960 ICR1ICR1 3199 nt2.51□□□□□ -2.01
YNL040WP53960 PHO91YNR013C 2685 nt2.5□□□□□ -2.01
YNL040WP53960 RPN3YER021W 1572 nt2.5□□□□□ -2.01
YNL040WP53960 MSH4YFL003C 2637 nt2.5□□□□□ -2.01
YNL040WP53960 YPD1YDL235C 504 nt2.5□□□□□ -2.01
YNL040WP53960 RPN9YDR427W 1182 nt2.5□□□□□ -2.01
YNL040WP53960 HYP2YEL034W 474 nt2.5□□□□□ -2.01
YNL040WP53960 PEA2YER149C 1263 nt2.5□□□□□ -2.01
YNL040WP53960 YGL159WYGL159W 1113 nt2.5□□□□□ -2.01
YNL040WP53960 YAL026C-AYAL026C-A 438 nt2.5□□□□□ -2.01
YNL040WP53960 MRPL38YKL170W 417 nt2.5□□□□□ -2.01
YNL040WP53960 NDL1YLR254C 570 nt2.5□□□□□ -2.01
YNL040WP53960 VMA6YLR447C 1038 nt2.5□□□□□ -2.01
YNL040WP53960 SRT1YMR101C 1032 nt2.5□□□□□ -2.01
YNL040WP53960 YBL055CYBL055C 1257 nt2.5□□□□□ -2.01
YNL040WP53960 PDR11YIL013C 4236 nt2.5□□□□□ -2.01
YNL040WP53960 VPS13YLL040C 9435 nt2.5□□□□□ -2.01
YNL040WP53960 SPT14YPL175W 1359 nt2.49□□□□□ -2.01
YNL040WP53960 MDM36YPR083W 1740 nt2.49□□□□□ -2.01
YNL040WP53960 tR(UCU)Q1tR(UCU)Q1 73 nt2.49□□□□□ -2.01
YNL040WP53960 YJL169WYJL169W 369 nt2.49□□□□□ -2.01
YNL040WP53960 MST28YAR033W 705 nt2.49□□□□□ -2.01
YNL040WP53960 GPN3YLR243W 819 nt2.49□□□□□ -2.01
YNL040WP53960 MRPL17YNL252C 846 nt2.49□□□□□ -2.01
YNL040WP53960 YDR061WYDR061W 1620 nt2.49□□□□□ -2.01
YNL040WP53960 DNL4YOR005C 2835 nt2.49□□□□□ -2.01
YNL040WP53960 DSE4YNR067C 3354 nt2.49□□□□□ -2.01
YNL040WP53960 PSY2YNL201C 2577 nt2.49□□□□□ -2.01
YNL040WP53960 SPF1YEL031W 3648 nt2.48□□□□□ -2.01
YNL040WP53960 MSB1YOR188W 3414 nt2.48□□□□□ -2.01
YNL040WP53960 YGL242CYGL242C 546 nt2.48□□□□□ -2.01
YNL040WP53960 ERG25YGR060W 930 nt2.48□□□□□ -2.01
YNL040WP53960 YAP5YIR018W 738 nt2.48□□□□□ -2.01
YNL040WP53960 RFA3YJL173C 369 nt2.48□□□□□ -2.01
YNL040WP53960 YAL064WYAL064W 285 nt2.48□□□□□ -2.01
YNL040WP53960 SMD3YLR147C 306 nt2.48□□□□□ -2.01
YNL040WP53960 RPL6BYLR448W 531 nt2.48□□□□□ -2.01
YNL040WP53960 PEX17YNL214W 600 nt2.48□□□□□ -2.01
YNL040WP53960 SNX41YDR425W 1878 nt2.48□□□□□ -2.01
YNL040WP53960 YCR064CYCR064C 411 nt2.47□□□□□ -2.01
YNL040WP53960 RUB1YDR139C 234 nt2.47□□□□□ -2.01
YNL040WP53960 YER066C-AYER066C-A 501 nt2.47□□□□□ -2.01
YNL040WP53960 YGR053CYGR053C 852 nt2.47□□□□□ -2.01
YNL040WP53960 YGR160WYGR160W 612 nt2.47□□□□□ -2.01
YNL040WP53960 YGR293CYGR293C 462 nt2.47□□□□□ -2.01
YNL040WP53960 YMR158C-AYMR158C-A 138 nt2.47□□□□□ -2.01
YNL040WP53960 YNL043CYNL043C 321 nt2.47□□□□□ -2.01
YNL040WP53960 ATP11YNL315C 957 nt2.47□□□□□ -2.01
YNL040WP53960 INO4YOL108C 456 nt2.47□□□□□ -2.01
YNL040WP53960 YPR027CYPR027C 834 nt2.47□□□□□ -2.01
YNL040WP53960 JID1YPR061C 906 nt2.47□□□□□ -2.01
YNL040WP53960 MUB1YMR100W 1863 nt2.47□□□□□ -2.01
YNL040WP53960 URB2YJR041C 3525 nt2.47□□□□□ -2.01
YNL040WP53960 TMN3YER113C 2121 nt2.47□□□□□ -2.01
YNL040WP53960 SGS1YMR190C 4344 nt2.46□□□□□ -2.01
YNL040WP53960 VPS41YDR080W 2979 nt2.46□□□□□ -2.01
YNL040WP53960 STN1YDR082W 1485 nt2.46□□□□□ -2.02
YNL040WP53960 YCR100CYCR100C 951 nt2.46□□□□□ -2.02
YNL040WP53960 YDL157CYDL157C 357 nt2.46□□□□□ -2.02
YNL040WP53960 SPC2YML055W 537 nt2.46□□□□□ -2.02
YNL040WP53960 YMR187CYMR187C 1296 nt2.46□□□□□ -2.02
YNL040WP53960 SGT1YOR057W 1188 nt2.46□□□□□ -2.02
YNL040WP53960 GCY1YOR120W 939 nt2.46□□□□□ -2.02
YNL040WP53960 SHG1YBR258C 429 nt2.46□□□□□ -2.02
YNL040WP53960 YDR239CYDR239C 2364 nt2.46□□□□□ -2.02
YNL040WP53960 UBP15YMR304W 3693 nt2.46□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms