Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.13■□□□□ 0.97
GRIA1P42261 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 AC079140.4-201ENST00000507448 529 ntBASIC21.13■□□□□ 0.97
GRIA1P42261 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
GRIA1P42261 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
GRIA1P42261 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.13■□□□□ 0.97
GRIA1P42261 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.13■□□□□ 0.97
GRIA1P42261 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
GRIA1P42261 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
GRIA1P42261 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 AC121338.2-201ENST00000622535 1744 ntBASIC21.12■□□□□ 0.97
GRIA1P42261 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.12■□□□□ 0.97
GRIA1P42261 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
GRIA1P42261 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC21.12■□□□□ 0.97
GRIA1P42261 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.12■□□□□ 0.97
GRIA1P42261 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GRIA1P42261 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GRIA1P42261 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
GRIA1P42261 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
GRIA1P42261 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.11■□□□□ 0.97
GRIA1P42261 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
GRIA1P42261 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.11■□□□□ 0.97
GRIA1P42261 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.11■□□□□ 0.97
GRIA1P42261 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.11■□□□□ 0.97
GRIA1P42261 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
GRIA1P42261 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
GRIA1P42261 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
GRIA1P42261 SLC25A24-204ENST00000569674 2357 ntBASIC21.1■□□□□ 0.97
GRIA1P42261 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
GRIA1P42261 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.1■□□□□ 0.97
GRIA1P42261 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.1■□□□□ 0.97
GRIA1P42261 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.1■□□□□ 0.97
GRIA1P42261 KRT87P-202ENST00000534226 1464 ntBASIC21.1■□□□□ 0.97
GRIA1P42261 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC21.1■□□□□ 0.97
GRIA1P42261 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
GRIA1P42261 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.1■□□□□ 0.97
GRIA1P42261 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
GRIA1P42261 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
GRIA1P42261 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.1■□□□□ 0.97
GRIA1P42261 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
GRIA1P42261 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.09■□□□□ 0.97
GRIA1P42261 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.09■□□□□ 0.97
GRIA1P42261 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 ZNRF2P3-201ENST00000424200 374 ntBASIC21.09■□□□□ 0.97
GRIA1P42261 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.09■□□□□ 0.97
GRIA1P42261 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.09■□□□□ 0.97
GRIA1P42261 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.09■□□□□ 0.97
GRIA1P42261 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
GRIA1P42261 AC073314.1-201ENST00000568729 2216 ntBASIC21.09■□□□□ 0.97
GRIA1P42261 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.09■□□□□ 0.97
GRIA1P42261 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 AP004607.4-201ENST00000530158 1459 ntBASIC21.08■□□□□ 0.97
GRIA1P42261 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 LINC01521-201ENST00000504184 1943 ntBASIC21.08■□□□□ 0.97
GRIA1P42261 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
GRIA1P42261 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
GRIA1P42261 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
GRIA1P42261 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
GRIA1P42261 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GRIA1P42261 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
GRIA1P42261 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GRIA1P42261 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.07■□□□□ 0.96
GRIA1P42261 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.07■□□□□ 0.96
GRIA1P42261 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.07■□□□□ 0.96
GRIA1P42261 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
GRIA1P42261 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
GRIA1P42261 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms