Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
GDF1P27539 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
GDF1P27539 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.92■□□□□ 0.62
GDF1P27539 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.92■□□□□ 0.62
GDF1P27539 AC133552.2-202ENST00000575694 574 ntBASIC18.92■□□□□ 0.62
GDF1P27539 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.92■□□□□ 0.62
GDF1P27539 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.92■□□□□ 0.62
GDF1P27539 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
GDF1P27539 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.92■□□□□ 0.62
GDF1P27539 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
GDF1P27539 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
GDF1P27539 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.91■□□□□ 0.62
GDF1P27539 TSPY6P-201ENST00000448518 926 ntBASIC18.91■□□□□ 0.62
GDF1P27539 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.91■□□□□ 0.62
GDF1P27539 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
GDF1P27539 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.91■□□□□ 0.62
GDF1P27539 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
GDF1P27539 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.91■□□□□ 0.62
GDF1P27539 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
GDF1P27539 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
GDF1P27539 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.91■□□□□ 0.62
GDF1P27539 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.91■□□□□ 0.62
GDF1P27539 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
GDF1P27539 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.91■□□□□ 0.62
GDF1P27539 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
GDF1P27539 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.9■□□□□ 0.62
GDF1P27539 OR10C1-204ENST00000622521 1039 ntBASIC18.9■□□□□ 0.62
GDF1P27539 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.9■□□□□ 0.62
GDF1P27539 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.9■□□□□ 0.62
GDF1P27539 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.9■□□□□ 0.62
GDF1P27539 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC18.9■□□□□ 0.62
GDF1P27539 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GDF1P27539 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
GDF1P27539 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
GDF1P27539 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.89■□□□□ 0.62
GDF1P27539 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
GDF1P27539 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
GDF1P27539 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.89■□□□□ 0.62
GDF1P27539 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDF1P27539 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GDF1P27539 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.89■□□□□ 0.61
GDF1P27539 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
GDF1P27539 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.89■□□□□ 0.61
GDF1P27539 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
GDF1P27539 AC016405.3-201ENST00000607710 860 ntBASIC18.89■□□□□ 0.61
GDF1P27539 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDF1P27539 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDF1P27539 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDF1P27539 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
GDF1P27539 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
GDF1P27539 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
GDF1P27539 FBXW4P1-201ENST00000426721 2239 ntBASIC18.88■□□□□ 0.61
GDF1P27539 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
GDF1P27539 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 GUSBP6-202ENST00000438529 1198 ntBASIC18.88■□□□□ 0.61
GDF1P27539 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.88■□□□□ 0.61
GDF1P27539 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.88■□□□□ 0.61
GDF1P27539 AL162412.1-201ENST00000567129 965 ntBASIC18.88■□□□□ 0.61
GDF1P27539 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.88■□□□□ 0.61
GDF1P27539 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.88■□□□□ 0.61
GDF1P27539 MKRN4P-201ENST00000444706 1521 ntBASIC18.88■□□□□ 0.61
GDF1P27539 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.88■□□□□ 0.61
GDF1P27539 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
GDF1P27539 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GDF1P27539 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms