Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RETP07949 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.07■□□□□ 0.96
RETP07949 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETP07949 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RETP07949 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC21.06■□□□□ 0.96
RETP07949 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
RETP07949 AP004607.7-201ENST00000527152 1677 ntBASIC21.06■□□□□ 0.96
RETP07949 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RETP07949 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
RETP07949 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.06■□□□□ 0.96
RETP07949 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RETP07949 AC211429.1-201ENST00000415277 523 ntBASIC21.06■□□□□ 0.96
RETP07949 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC21.06■□□□□ 0.96
RETP07949 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.06■□□□□ 0.96
RETP07949 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.06■□□□□ 0.96
RETP07949 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.06■□□□□ 0.96
RETP07949 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.06■□□□□ 0.96
RETP07949 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.06■□□□□ 0.96
RETP07949 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.06■□□□□ 0.96
RETP07949 REXO1L12P-201ENST00000622156 912 ntBASIC21.06■□□□□ 0.96
RETP07949 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RETP07949 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.05■□□□□ 0.96
RETP07949 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RETP07949 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RETP07949 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RETP07949 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.05■□□□□ 0.96
RETP07949 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RETP07949 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.05■□□□□ 0.96
RETP07949 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.05■□□□□ 0.96
RETP07949 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.05■□□□□ 0.96
RETP07949 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.05■□□□□ 0.96
RETP07949 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.05■□□□□ 0.96
RETP07949 AL591742.1-201ENST00000604433 565 ntBASIC21.05■□□□□ 0.96
RETP07949 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RETP07949 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.05■□□□□ 0.96
RETP07949 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RETP07949 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.05■□□□□ 0.96
RETP07949 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RETP07949 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
RETP07949 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RETP07949 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.04■□□□□ 0.96
RETP07949 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RETP07949 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.04■□□□□ 0.96
RETP07949 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RETP07949 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RETP07949 FAM197Y4-202ENST00000622692 608 ntBASIC21.04■□□□□ 0.96
RETP07949 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.04■□□□□ 0.96
RETP07949 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.04■□□□□ 0.96
RETP07949 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RETP07949 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.03■□□□□ 0.96
RETP07949 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RETP07949 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.03■□□□□ 0.96
RETP07949 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.03■□□□□ 0.96
RETP07949 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 AC079089.2-201ENST00000531211 1277 ntBASIC21.03■□□□□ 0.96
RETP07949 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.03■□□□□ 0.96
RETP07949 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RETP07949 LINC01023-201ENST00000606054 436 ntBASIC21.03■□□□□ 0.96
RETP07949 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.03■□□□□ 0.96
RETP07949 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
RETP07949 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.03■□□□□ 0.96
RETP07949 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.03■□□□□ 0.96
RETP07949 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RETP07949 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.03■□□□□ 0.96
RETP07949 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RETP07949 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.02■□□□□ 0.96
RETP07949 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
RETP07949 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
RETP07949 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
RETP07949 AC008175.2-201ENST00000612840 297 ntBASIC21.02■□□□□ 0.96
RETP07949 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.02■□□□□ 0.96
RETP07949 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RETP07949 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms