Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDRT1O95170 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.54■□□□□ 0.56
CDRT1O95170 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CDRT1O95170 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 CREM-229ENST00000474362 1030 ntTSL 2 BASIC18.54■□□□□ 0.56
CDRT1O95170 MIR6724-1-201ENST00000616420 92 ntBASIC18.54■□□□□ 0.56
CDRT1O95170 MIR6724-2-201ENST00000616483 92 ntBASIC18.54■□□□□ 0.56
CDRT1O95170 MIR6724-4-201ENST00000617390 92 ntBASIC18.54■□□□□ 0.56
CDRT1O95170 MIR6724-3-201ENST00000622482 92 ntBASIC18.54■□□□□ 0.56
CDRT1O95170 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CDRT1O95170 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.54■□□□□ 0.56
CDRT1O95170 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.54■□□□□ 0.56
CDRT1O95170 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDRT1O95170 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CDRT1O95170 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDRT1O95170 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
CDRT1O95170 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.53■□□□□ 0.56
CDRT1O95170 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.53■□□□□ 0.56
CDRT1O95170 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.53■□□□□ 0.56
CDRT1O95170 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 AC112907.3-201ENST00000577781 2400 ntBASIC18.53■□□□□ 0.56
CDRT1O95170 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.53■□□□□ 0.56
CDRT1O95170 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CDRT1O95170 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDRT1O95170 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.52■□□□□ 0.56
CDRT1O95170 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CDRT1O95170 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
CDRT1O95170 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.52■□□□□ 0.56
CDRT1O95170 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDRT1O95170 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDRT1O95170 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDRT1O95170 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.52■□□□□ 0.55
CDRT1O95170 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDRT1O95170 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
CDRT1O95170 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CDRT1O95170 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.51■□□□□ 0.55
CDRT1O95170 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.51■□□□□ 0.55
CDRT1O95170 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.51■□□□□ 0.55
CDRT1O95170 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.51■□□□□ 0.55
CDRT1O95170 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.51■□□□□ 0.55
CDRT1O95170 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDRT1O95170 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CDRT1O95170 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.51■□□□□ 0.55
CDRT1O95170 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDRT1O95170 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.5■□□□□ 0.55
CDRT1O95170 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.5■□□□□ 0.55
CDRT1O95170 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CDRT1O95170 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms