Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.98■□□□□ 0.31
SCAF4O95104 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 PEMT-206ENST00000435340 960 ntTSL 5 BASIC16.98■□□□□ 0.31
SCAF4O95104 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC16.98■□□□□ 0.31
SCAF4O95104 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
SCAF4O95104 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
SCAF4O95104 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.98■□□□□ 0.31
SCAF4O95104 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SCAF4O95104 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.97■□□□□ 0.31
SCAF4O95104 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SCAF4O95104 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.97■□□□□ 0.31
SCAF4O95104 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.97■□□□□ 0.31
SCAF4O95104 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SCAF4O95104 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SCAF4O95104 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC16.97■□□□□ 0.31
SCAF4O95104 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SCAF4O95104 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SCAF4O95104 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC16.97■□□□□ 0.31
SCAF4O95104 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SCAF4O95104 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
SCAF4O95104 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
SCAF4O95104 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SCAF4O95104 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 HCG11-201ENST00000411553 5696 ntBASIC16.96■□□□□ 0.31
SCAF4O95104 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SCAF4O95104 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.96■□□□□ 0.31
SCAF4O95104 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.96■□□□□ 0.31
SCAF4O95104 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.96■□□□□ 0.31
SCAF4O95104 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.96■□□□□ 0.31
SCAF4O95104 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 AC241377.3-202ENST00000626088 1088 ntBASIC16.96■□□□□ 0.31
SCAF4O95104 AC241585.3-202ENST00000628937 1088 ntBASIC16.96■□□□□ 0.31
SCAF4O95104 AC245100.8-202ENST00000629247 1058 ntBASIC16.96■□□□□ 0.31
SCAF4O95104 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.96■□□□□ 0.31
SCAF4O95104 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
SCAF4O95104 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SCAF4O95104 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SCAF4O95104 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCAF4O95104 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SCAF4O95104 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCAF4O95104 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SCAF4O95104 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SCAF4O95104 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC16.95■□□□□ 0.3
SCAF4O95104 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SCAF4O95104 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC16.95■□□□□ 0.3
SCAF4O95104 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.95■□□□□ 0.3
SCAF4O95104 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.95■□□□□ 0.3
SCAF4O95104 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SCAF4O95104 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.94■□□□□ 0.3
SCAF4O95104 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SCAF4O95104 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.94■□□□□ 0.3
SCAF4O95104 AIRN-201ENST00000601203 4374 ntBASIC16.94■□□□□ 0.3
SCAF4O95104 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.94■□□□□ 0.3
SCAF4O95104 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.94■□□□□ 0.3
SCAF4O95104 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
SCAF4O95104 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SCAF4O95104 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms