Protein–RNA interactions for Protein: A0A1B0GVL6

TMEM238L, HCG1800530, isoform CRA_b, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238LA0A1B0GVL6 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TMEM238LA0A1B0GVL6 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TMEM238LA0A1B0GVL6 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.56□□□□□ -0.08
TMEM238LA0A1B0GVL6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 PKD1P5-201ENST00000532415 10291 ntBASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 HTR7P1-202ENST00000624664 4411 ntBASIC14.55□□□□□ -0.08
TMEM238LA0A1B0GVL6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TMEM238LA0A1B0GVL6 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms