Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 AP003097.1-201ENST00000530657 1135 ntBASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAV17A0A0B4J275 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 KRT18P68-201ENST00000392293 1000 ntBASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 GCSHP5-201ENST00000443090 522 ntBASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 AC128676.1-201ENST00000454392 318 ntBASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 HLA-B-256ENST00000639848 1089 ntBASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAV17A0A0B4J275 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 AC098590.1-201ENST00000468126 897 ntBASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 AC060766.5-201ENST00000590539 871 ntBASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.91■□□□□ 0.62
TRAV17A0A0B4J275 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 RPS2P52-201ENST00000469610 820 ntBASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRAV17A0A0B4J275 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
TRAV17A0A0B4J275 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 AC142381.4-202ENST00000563973 229 ntBASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRAV17A0A0B4J275 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms