Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC15.82■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SRD5A1P1-201ENST00000442297 786 ntBASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC027702.1-201ENST00000563810 1770 ntBASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AL356740.2-201ENST00000601559 647 ntBASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC112907.3-201ENST00000577781 2400 ntBASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 PTCHD3P2-201ENST00000424937 1205 ntBASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AC092171.4-201ENST00000609130 632 ntBASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-1A0A0A6YYK1 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms