Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 AC053503.5-201ENST00000601508 636 ntBASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGA11Q9Y5H2 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 EEF1DP3-203ENST00000566025 782 ntBASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 AL049796.1-201ENST00000565336 1766 ntBASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA11Q9Y5H2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA11Q9Y5H2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 AL157384.1-201ENST00000445995 2473 ntBASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 AC079140.4-201ENST00000507448 529 ntBASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA11Q9Y5H2 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.2■□□□□ 0.83
PCDHGA11Q9Y5H2 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 LINC02228-203ENST00000641970 1355 ntBASIC20.2■□□□□ 0.82
PCDHGA11Q9Y5H2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 AC092667.1-201ENST00000434301 2586 ntBASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHGA11Q9Y5H2 KRT87P-202ENST00000534226 1464 ntBASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 AC123595.1-201ENST00000440769 1046 ntBASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHGA11Q9Y5H2 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms