Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
POLR1DQ9Y2S0 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 SUDS3P1-201ENST00000505831 966 ntBASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 AC012414.1-201ENST00000556676 535 ntBASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1DQ9Y2S0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 AL354811.1-201ENST00000610286 706 ntBASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1DQ9Y2S0 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 AC055733.4-201ENST00000638462 1354 ntBASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.59■□□□□ 0.57
POLR1DQ9Y2S0 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1DQ9Y2S0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1DQ9Y2S0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
POLR1DQ9Y2S0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
POLR1DQ9Y2S0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 794.4 ms