Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.83■□□□□ 0.77
LRCH1Q9Y2L9 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LRCH1Q9Y2L9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 AC020907.5-201ENST00000624372 1936 ntBASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
LRCH1Q9Y2L9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.81■□□□□ 0.76
LRCH1Q9Y2L9 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 AL451085.2-201ENST00000605085 799 ntBASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
LRCH1Q9Y2L9 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 LINC01529-204ENST00000636474 1715 ntBASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
LRCH1Q9Y2L9 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRCH1Q9Y2L9 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LRCH1Q9Y2L9 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms