Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
UBQLN1Q9UMX0 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 AC091799.1-201ENST00000422823 811 ntBASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 AC069236.1-201ENST00000604339 616 ntBASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 AC008694.1-202ENST00000636953 945 ntBASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 AC244015.2-201ENST00000616358 1861 ntBASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC22.49■■□□□ 1.19
UBQLN1Q9UMX0 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 TSPY6P-201ENST00000448518 926 ntBASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 AC105036.2-201ENST00000569468 176 ntBASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 OR10C1-204ENST00000622521 1039 ntBASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
UBQLN1Q9UMX0 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
UBQLN1Q9UMX0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 GUSBP6-202ENST00000438529 1198 ntBASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
UBQLN1Q9UMX0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
UBQLN1Q9UMX0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 FBXW4P1-201ENST00000426721 2239 ntBASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 SLC29A4P1-201ENST00000398760 971 ntBASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
UBQLN1Q9UMX0 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 AL355802.2-201ENST00000402069 882 ntBASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 AL512625.2-201ENST00000417533 625 ntBASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.44■■□□□ 1.18
UBQLN1Q9UMX0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 BID-212ENST00000614949 1988 ntTSL 5 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
UBQLN1Q9UMX0 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC22.43■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms